Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq66944 161 2e-34 >seq66944 Length=5658 Score = 161 bits (178), Expect = 2e-34 Identities = 299/434 (69%), Gaps = 5/434 (1%) Strand=Plus/Minus Query 78627 CTTCTACAATGCAGTTTCGACTCACAAACTTTCATTACCGACACCGATTATGGCAGGCGT 78686 ||||||| |||| |||| ||| ||| |||| || || ||||| || ||| | || || Sbjct 1955 CTTCTACGATGCTATTTCAACTTTTAAAATTTCTTTGCCCACACCAATCATGTCCGGTGT 1896 Query 78687 TCGTACCCCGACACGCCAGTTTAGTTCGTGTGTTAAGATTGAATCAGGCGACTCTTTGCA 78746 || || || | |||||||| ||||| || || ||||| || || || | | Sbjct 1895 ACGCACACCTATTCGCCAGTTCAGTTCCTGCGTACTAATTGAGTCCGGTGATAGCCTCGA 1836 Query 78747 TTCAATCAATGAAGTGGCTAAATCAATTGTAAGTTACATTAGTAAGCGTGCAGGTATCGG 78806 ||| || |||| | | | ||||||| | || || | || || ||||| || Sbjct 1835 TTCGATTAATGCAACTTCAAGTGCAATTGTGAAATATGTTTCCCAACGGGCTGGTATTGG 1776 Query 78807 TGTTAACGGCGGTGCGATTCGTGCTGAAGGGGCAGT-CGTT-CGTTCAGGTGAGATTCGT 78864 |||| | |||| |||||||| ||| ||| || | ||| || || | | Sbjct 1775 CATTAATGCCGGTCGAATTCGTGCCTT--GGGAAGTTCGATACGTGACGGCGAAGCTTTT 1718 Query 78865 CACACTGGTGTAATTCCATTCTGGAAACACTTTCAAACTGCGGTTAAATCGTGTTCTCAA 78924 || || ||| || ||||| | ||||||||||| || || |||||||| ||||||||| Sbjct 1717 CATACGGGTTGTATCCCATTTTATAAACACTTTCAGACCGCAGTTAAATCTTGTTCTCAA 1658 Query 78925 GGTGGTGTACGTGGGGGTGCTGCGACTCTAACTTACCCGATTTGGCACTTAGAAGTTGAA 78984 ||||||||||| || |||||||| || ||| || || || |||||||| ||||| ||| Sbjct 1657 GGTGGTGTACGCGGTGGTGCTGCAACACTATTCTATCCAATATGGCACTTGGAAGTGGAA 1598 Query 78985 AAACTGTTAGTTCTGAAGAACAACAAAGGTGTTGAAGAAAACCGTATTCGTCATCTTGAC 79044 | | | || ||||||| ||| || || ||||| |||||| ||||||| | ||| Sbjct 1597 AGTTTACTGGTCTTGAAGAATAACCGTGGCGTAGAAGATAACCGTGTTCGTCACATGGAC 1538 Query 79045 TACAGTGTATCAAT 79058 || |||| ||||| Sbjct 1537 TATGGTGT-TCAAT 1525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 789495517774080