Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq66611 96.9 4e-15 >seq66611 Length=1920 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/283 (69%), Gaps = 11/283 (4%) Strand=Plus/Minus Query 150554 TTTTACGTATCATTTGCTTGTTCTTTTGCATTTGGAGAACTCAAACTTCTGGAAGGAAGT 150613 ||||||||| ||||| |||||||| || |||| ||| | ||||| ||||||| | | Sbjct 1836 TTTTACGTAAGTTTTGCCTGTTCTTTCGCTTTTGCAGAGCGTGAACTTATGGAAGGTAAT 1777 Query 150614 GCTAAAATCATCGGACTTATCGCGAGGGATGAATCACAACACATGACCATCACTCAGAAC 150673 |||||||| || |||||| || | || ||| | |||| | ||| |||||| | Sbjct 1776 GCTAAAATAATTAAACTTATTGCCCGTGACGAAGCGTTACACTTAACCGGAACTCAGCAT 1717 Query 150674 ATTCTGAACAAGTGGCGTGATGGTGA---TGATCCTGATATGGTAGAGATTGCCAAGGAA 150730 ||| | ||| ||| ||| || |||||| || |||| | |||||||| ||| Sbjct 1716 ATTTTAAACTTACTACGTAGTGGCGAAGATGATCCGGAAATGGCTAAAATTGCCAAAGAA 1657 Query 150731 -GAAGAGATCAACGTATACAACATGTTCAAAGATTGTGT---TGAAGAGGAGAAACTCTG 150786 | | || || || || || |||||| | || | ||| |||| ||| || Sbjct 1656 TGTCGCCATGAATGT-TATAATATGTTC---GTTTTAGCAGCTGAGCAGGAAAAAGAATG 1601 Query 150787 GGCAGAATACCTGTTCAAAGATGGTTCTATCATTGGTTTGAAT 150829 ||||||||| |||||| || |||||||| || ||| ||||| Sbjct 1600 GGCAGAATATTTGTTCAGTGACGGTTCTATGATAGGTCTGAAT 1558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605160317120320