Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq66779 158 1e-33 >seq66779 Length=2524 Score = 158 bits (174), Expect = 1e-33 Identities = 264/373 (71%), Gaps = 8/373 (2%) Strand=Plus/Plus Query 27060 AATATTATATGTCTCTCCAGATTTGCCTTTAGTTACTACTAGGTGTAATGC-CTCTG-CG 27117 ||||||||| || ||||| || || |||||||| | ||| || ||| | ||| | || Sbjct 1359 AATATTATAGGTTTCTCCCGACTTACCTTTAGTAATAACT--GTATAAAGAGCTCGGACG 1416 Query 27118 TGATCGTCAACGTATAACCAGTCTCTTACTTGAAGACCATTACCATAAACAGGGATTGGT 27177 || || ||||| || | |||||||| | ||| | ||||| || |||| ||| | |||| Sbjct 1417 TGGTCATCAACATAGAGCCAGTCTCGGATTTGCATACCATCGCCGTAAATAGGCAGTGGT 1476 Query 27178 TTATGCATTAAGAT-ATTTGTTATCGTTTTAGGTATTAGTTTTTCTGGATGATGATATGC 27236 | | || || ||| | || | ||| ||||||||||| ||| |||||| | Sbjct 1477 TGAC-CACGCAGCGCATTAATAATGATCAGAGGAATTAGTTTTTCCGGAAAATGATAAGG 1535 Query 27237 TCCAAAATTATTTGAACAATTTGTTATAACTGTCGGAATACCATAAGTACGATGCCACGC 27296 ||| | || || ||||| || || |||| |||||| ||| |||||||||| ||| || Sbjct 1536 ACCATAGTTGTTAGAACAGTTCGTAATAATAATCGGAAGACCGTAAGTACGATACCAAGC 1595 Query 27297 TCTTACCAAATGATCGCTTGCAGCTTTAGATGCAGCATATGGACTACTTGGTTTATAAGG 27356 | |||||||||||||| |||||| | ||| ||||| ||| || ||||| ||||| Sbjct 1596 GCGAACCAAATGATCGCTGCTAGCTTTTGTTGCTGCATAGGGATTATTTGGTGCATAAGA 1655 Query 27357 ATTCTGTTCTGTAAACGGAT-AATCTCCTTCTTCCAGATCACCATACACTTCATCTGTTG 27415 | ||| || || || | |||| || ||| | |||||| | |||||||| || | Sbjct 1656 CGTAGTTTCAGTGAAAAAATCATTCTCATT-TTCTAAGTCACCAAAAACTTCATCAGTAG 1714 Query 27416 AAATATGATGGAA 27428 | | ||| ||||| Sbjct 1715 ATACATGGTGGAA 1727 Score = 116 bits (128), Expect = 4e-21 Identities = 264/393 (67%), Gaps = 13/393 (3%) Strand=Plus/Plus Query 26332 ATCAAACTCAACAACACCAAATCTTTCAGGATCATTTACGTGATACCCAAAGATATTAGC 26391 |||||| || || || ||||| | || ||||| |||| || || || || | | | || Sbjct 562 ATCAAATTCCACTACGCCAAACCGCTCTGGATCCATTACTTGGTATCCGAATACAGTTGC 621 Query 26392 TCCACCATTCTTTTCAA-TATGTTCTTTAGCAGAATCTAAAATGCTACCAAAACTCTGAC 26450 ||| ||| |||||| || | ||| ||| | | ||| ||||| |||| Sbjct 622 TCCTTTATTTTTTTCAGCTACCTGCTT---CAGTTTTT-------TACTAAAACCTTGAC 671 Query 26451 CAAAGAATAAATTATCACCTAGCACAAGTGCTACAG-AATCTTCACCAATAAAGTTCTCA 26509 ||||||| | |||||||||||| || | || |||| || || | ||||| | ||| Sbjct 672 CAAAGAAAATATTATCACCTAGTACTA-AGCAACAGCTTTCCCCATCGATAAACTCTTCA 730 Query 26510 CCAATAATAAACGCTTCTGCTAAACCTTTTGGGCTATCCTGTATTGCATACTGTAGGGAA 26569 || || ||||| |||| |||||| || ||||| |||| |||||| ||| | Sbjct 731 CCTATGATAAATGCTTGTGCTAAGCCGGCGGGGCTTGGCTGTCCTGCATATCTTAGACGA 790 Query 26570 ATACCAAAAGAAGAACCATCACCTAGAAGATTTACAAAATTAATTTGATCTTCTGGTGTT 26629 | |||||| | |||| ||| || | | | | ||| |||||| | ||| | Sbjct 791 AGACCAAATTTATCGCCATTACCCAGCAATTGTTGATAATGCGGTTGATCATTTGGCCTA 850 Query 26630 GTAATTATTAGTATTTCCCTAATTCCAGAAAGCATTAGGACAGAGAGTGGATAATAAATC 26689 || || || | || || | ||||| | |||||| || || || | |||||| |||||| Sbjct 851 GTGATAATAAAAATATCACGGATTCCTGCAAGCATAAGTACTGATAATGGATAGTAAATC 910 Query 26690 ATAGGTTTATCGTAAATTGGTAATAGTTGTTTA 26722 || ||||| || |||| || ||||| |||||| Sbjct 911 ATTGGTTTGTCATAAACAGGCAATAGCTGTTTA 943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475032512298240