Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq66944 105 6e-18 >seq66944 Length=5658 Score = 105 bits (116), Expect = 6e-18 Identities = 153/211 (73%), Gaps = 10/211 (5%) Strand=Plus/Plus Query 123353 CCGAGGTTGATTGCAGACAGCGTACAAAGTGCAATCTCGCCATCGTCCTCAGGATTTTTG 123412 ||||| |||| ||| || || |||||||| ||||| ||||||| || ||| | | | Sbjct 1131 CCGAGATTGAATGCTGATAGAGTACAAAGGGCAATTTCGCCATTTTCATCATTAATATCT 1190 Query 123413 AGGTCATTGATCGCGTGAGTAGGCAGGGCAATCTCCATGCACAGGTTGGACTGTTTCACC 123472 || || || | | ||| || | | |||| |||| ||| | ||||||||| | ||| Sbjct 1191 AG--CAGTGGT----TTAGTTGGTAAGACAATTTCCAAGCATAAGTTGGACTGGTGCACT 1244 Query 123473 GGGGCCAGTTCTGGATTGAACGGGCTGTTGGTGTTGCAGTGGTCAACGTGCTGAATGTAG 123532 || || | ||||||| |||||||| | || |||||||||||||||| ||| || || Sbjct 1245 GGAGCAATGGCTGGATTAAACGGGCTATGCGTATTGCAGTGGTCAACGTTCTGGATATAT 1304 Query 123533 ATGCGTCCTGTCTGACTGCGC--TCCTGCAT 123561 || || || || ||| ||||| || ||||| Sbjct 1305 ATACGACCGGT-TGA-TGCGCGTTCTTGCAT 1333 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 122223 TCAATTCGGTCACGGGTCACGTTCACCTCTTCCGGACGCCAGAAGAATGCCAGTTGCTTT 122282 ||||| || ||||| | || | ||||||||| |||||||||||||| | ||||| ||| Sbjct 1 TCAATGCGATCACGAGATACATCCACCTCTTCTGGACGCCAGAAGAAAGAAAGTTGTTTT 60 Query 122283 TCGATCAGCTTTTCGAACTTAGCGTGTTTTTGCTGGTCATAACGAGAAACGTTCGGCGTC 122342 || || |||||||| || || | | |||||| |||||| | || | || ||| || | Sbjct 61 TCAATTAGCTTTTCAAAAATACCATATTTTTGTTGGTCAAAGCGTGCAATGTTAACCGGC 120 Query 122343 TCACCGAGGAACATCGGCT 122361 | ||| | ||||| |||| Sbjct 121 TGACCAAAAAACATAGGCT 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485622042497280