Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_023856.1 Length=152460 Score E Sequences producing significant alignments: (Bits) Value seq66944 109 5e-19 >seq66944 Length=5658 Score = 109 bits (120), Expect = 5e-19 Identities = 269/400 (67%), Gaps = 16/400 (4%) Strand=Plus/Minus Query 31482 CCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTTCTT 31541 || ||||| ||||||||||| || || || || | ||||| |||||||| || || || Sbjct 1918 CCCACACCAATCATGTCCGGTGTACGCACACCTATTCGCCAGTTCAGTTCCTGCGTACTA 1859 Query 31542 ATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGT---ATTGTTGAT 31598 || | ||||||| | | || || || ||||| || | |||| ||||| | Sbjct 1858 ATTGAGTCCGGTGATAGCCTCGATTCGATTAATGCAACTTC---AAGTGCAATTGTGAAA 1802 Query 31599 TATGTATCCAAACGCGCTGGGATCGGATTTGATGTTGGAGCAATTCGTGGCATCGGTAGC 31658 ||||| ||| |||| ||||| || || || ||| || |||||||| | | || || Sbjct 1801 TATGTTTCCCAACGGGCTGGTATTGGCATTAATGCCGGTCGAATTCGTGCCTTGGGAAGT 1742 Query 31659 CCTATCCGAAAAGGTGAAATGGTGCACACAGGCCTGGTTCC--TTTCATAA--AATATCT 31714 | || || | || ||| | || || || || ||| ||| |||| | | || Sbjct 1741 TCGATACGTGACGGCGAAGCTTTTCATAC-GGGTTGTATCCCATTTTATAAACACTTTCA 1683 Query 31715 GACTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAAC-TTGCT 31773 ||| ||| | || ||||| |||||||| ||| | || || || | ||||| | | Sbjct 1682 GAC---CGCAGTTAAATCTTGTTCTCAAGGTGGTGTACGCGGTGGTGCTGCAACACTATT 1626 Query 31774 ATATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTC 31833 ||| || || ||||| | || | || | | ||||| ||||||| |||||||| Sbjct 1625 CTAT-CCAATATGGCACTTGGAAGTGGAAAGTTTACTGGTCTTGAAGAATAACCGTGGCG 1567 Query 31834 TTGAAGAGAACCGTGAACGCCGTATCGACTATGGTATTCA 31873 | ||||| ||||||| || | || ||||||||| |||| Sbjct 1566 TAGAAGATAACCGTGTTCGTCACATGGACTATGGTGTTCA 1527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487335807046400