Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_024121.1 Length=167266 Score E Sequences producing significant alignments: (Bits) Value seq66944 183 3e-41 >seq66944 Length=5658 Score = 183 bits (202), Expect = 3e-41 Identities = 297/423 (70%), Gaps = 12/423 (3%) Strand=Plus/Plus Query 139708 ACATCAGATCGTTGATTTGCACACCGTAATCCAAGTGACGAATGCGGTTCTCTTCAACGC 139767 ||||||| | || | ||| ||||| || |||| |||||||| ||||| ||||| |||| Sbjct 1510 ACATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGC 1569 Query 139768 CTTTGTTGTTTTTCAGAACAAGCAAGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACA 139827 | ||| || |||| || || || |||| |||||||||||||| ||||||||| | | Sbjct 1570 CACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATA 1629 Query 139828 ACGTCGCTGCACCACCACGAACACCACCTTGAGAACAGGATTTAACCGCAGTCTGGAAGT 139887 || || |||||||| || ||||||||||||||||| |||||||| || ||||| |||| Sbjct 1630 GTGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGT 1689 Query 139888 GTTTCCAGAAAGGAATTACGCCAGTGTGTTTGACTTCACCGAAACCAATTTTTGAGCCTT 139947 |||| | || || || || || || |||| ||| || | | || | | Sbjct 1690 GTTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCG---TCACGTATCGAACTTC 1746 Query 139948 C---AGCTCGGATTCGACCTGCGTTGATGCCGATTCCAGCTCGTTTAGAAATGTACTTGA 140004 | || || |||||||| || || ||||| || ||||| |||| |||| || || | Sbjct 1747 CCAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCA 1806 Query 140005 CAATCGATGCTGCTG-AGT--CGTTGATACTGTTAAGCGAATCATCAGACTCGATAACAA 140061 |||| ||| || ||| | || || | || |||| | ||||| || | | Sbjct 1807 CAAT---TGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTA 1863 Query 140062 CACACGAACTGAATTGACGAATCGGTGTACGGGCTCCTGCCATAATAGGAGTTGGCAATG 140121 | || |||||||| || ||||| ||||| || | || | ||| || || || ||||| | Sbjct 1864 CGCAGGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAG 1923 Query 140122 AAA 140124 ||| Sbjct 1924 AAA 1926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534675355393920