Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_024125.2 Length=168470 Score E Sequences producing significant alignments: (Bits) Value seq66944 190 2e-43 >seq66944 Length=5658 Score = 190 bits (210), Expect = 2e-43 Identities = 295/420 (70%), Gaps = 6/420 (1%) Strand=Plus/Plus Query 140752 CATCAAATCATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCC 140811 ||||| | ||||| |||||||||||| ||||| ||||||| ||||| ||||||||||| Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 140812 TTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 140871 |||||| ||||| || || | | |||| |||||||| ||||| || ||||| | Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 140872 AGTAGCAGCGCCGCCACGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATG 140931 || ||||| || || || | ||||| || ||||| |||||||| || |||||||| || Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 140932 TTTCCAAAAAGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTC 140991 ||| |||| || ||| ||| ||||| |||| || | || | |||| | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCC---GTCACGTATCGAACTTCC 1747 Query 140992 ---AGCACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAAC 141048 |||||||| ||| | ||||| ||||| ||||| |||| || | ||||| || Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 141049 AATTGAAGCGGAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACAACACA 141108 ||||| | |||| ||| || || | | ||| || | |||||| | || || Sbjct 1808 AATTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCA 1867 Query 141109 TGAACTAAACTGTCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCAATGAAAT 141168 ||||| ||||| ||| | || || || ||| | ||| || || || ||||| ||||| Sbjct 1868 GGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAAT 1927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538524930985600