Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq66546 87.8 3e-12 >seq66546 Length=1799 Score = 87.8 bits (96), Expect = 3e-12 Identities = 94/123 (76%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 142977 GAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCTTGCATATAGAACTTAGGAGATGG 143036 || ||| | |||||| ||| | | ||||| || |||||||||||| | | | |||| Sbjct 997 GAATGGTCCACTTGGCAAAGGAGAGGTGATCCGGTATTGCATATAGAATTGGGTAAATGG 1056 Query 143037 GCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATAGCCAACGGT 143096 || ||| || | || ||||| || |||| |||||||| |||||||||||| ||||||| Sbjct 1057 GCTGATATTATGCTGATAGCACCATTAAGCGCAAATACATTAGCAAAAATA-TCAACGGT 1115 Query 143097 ATA 143099 ||| Sbjct 1116 ATA 1118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902655135166720