Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq25273 100 7e-16 seq44371 91.5 3e-13 >seq25273 Length=2210 Score = 100 bits (110), Expect = 7e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| ||||| |||||||| || | |||||| |||| |||||| Sbjct 2169 ACTGGCAAAACCATCACCTTGGAAGTCGAGCCATGTGACACTATCGAGAACGTAAAGGCT 2110 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || || ||||| |||||||| ||| || || ||| | | || ||||| || ||| Sbjct 2109 AAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAACAACGTTTAATTTTCGCTGGCAAG 2050 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| | | ||| |||| |||||| |||| || |||||||| |||||| Sbjct 2049 CAATTGGAAGATGGCCGTGCCTTGTCCGACTACAACATCCAAAAGGAGTCTACCCTTCAC 1990 >seq44371 Length=3624 Score = 91.5 bits (100), Expect = 3e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| ||||| | || || ||| ||| || || | ||| Sbjct 1306 AAAACTCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTTCGGATACTATTGAACAT 1247 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||||||||| || ||||||||| || ||| ||| | | || || Sbjct 1246 GTTAAAGCTAA-GATTCAAGACAAGGAAGGAATTCCACCTGACCAGCAACGCTTAATTTT 1188 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || || || |||||||| ||| | || ||||| ||||| ||| | || || || || Sbjct 1187 CGCTGGCAAACAATTGGAAGACGGACGAACCTTGGCTGATTATAACATTCAAAAGGAATC 1128 Query 206364 TACTCTTCACCTTGTTTTG 206382 ||| | || || || ||| Sbjct 1127 TACGTTGCATCTAGTATTG 1109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180807007526792