Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_025437.1 Length=169062 Score E Sequences producing significant alignments: (Bits) Value seq66944 203 4e-47 seq66648 96.9 4e-15 >seq66944 Length=5658 Score = 203 bits (224), Expect = 4e-47 Identities = 380/554 (69%), Gaps = 21/554 (4%) Strand=Plus/Plus Query 142262 AATTTATCTTGATCTTCAAAGAACGAGTAGTATAGTTCGCCTGACATTTCGTGAGGG-CT 142320 |||| || ||||| ||||||| | | |||||| |||| || || ||| || || Sbjct 1416 AATTCTTCCTGATCAGCAAAGAATGCATCGTATAGA---CCTGGCACATC-TGACGGACT 1471 Query 142321 AAATAAAGTAATATAATCATTTTTACCA-----AGGCGTTCCATCATAAGGTCATTAATC 142375 ||||| |||||||| | || || ||||| | ||| || | ||| | Sbjct 1472 AAATAGAGTAATATC-----TCTTCCCTGGAGTAGGCGCTGATACATCAGTTTATTCAAT 1526 Query 142376 TGAATTCCGTAGTCCATATGTCTAATACGGTTTTCATCCACGCCTTTGTTATTTTTCAGA 142435 |||| || |||||||| || | || |||||| || || ||||| |||||| |||| Sbjct 1527 TGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGGTTATTCTTCAAG 1586 Query 142436 ACCAACAGGTTCTCTACTTCTAAGTGCCACATCGGATAATACGCTGTAGCAGCACCACCA 142495 |||| | | || ||||| |||||||| || ||||| | ||| ||||||||||| Sbjct 1587 ACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTTGCAGCACCACCG 1646 Query 142496 CGAATACCACCTTGAGAACAAGATTTTACTGCAGTTTGGAAATGTTTCCAGAATGGAATA 142555 || | ||||||||||||||||||||| ||||| || || || ||||| | ||||| ||| Sbjct 1647 CGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTGTTTATAAAATGGGATA 1706 Query 142556 ACACCCGTATGTCGAACTTCACCCATACCAATCTTAGAACCTTC---TGCACGAAGCATA 142612 ||||||||| | |||| || || ||| |||| | | ||||||| | Sbjct 1707 CAACCCGTATGAAAAGCTTCGCCGTCACGTATC---GAACTTCCCAAGGCACGAATTCGA 1763 Query 142613 CCAACGTTGATACCGATACCAGCTCGTTTAGAAATATATTCAATAATTGATGCTGAAGTT 142672 || | || || || |||||||| |||| |||| ||||| | ||||| ||||||| Sbjct 1764 CCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAATTGCACTTGAAGTT 1823 Query 142673 TTGTTAATAGATTTTAACGAATCACCGGCTTCAATAACTACACAACTAGAGAACTGGCGA 142732 ||||| || | | |||||||| ||||| | ||| || | |||||||||| Sbjct 1824 GCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGAACTGAACTGGCGA 1883 Query 142733 GTTGGAGTACGAGCACCTGCCATAATTGGGGTTGGCAATGAAACTTGATGAGTAGAAACG 142792 | || || || |||| | ||| ||||| || ||||| |||| || | ||| |||| Sbjct 1884 ATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAATTTTAAAAGTTGAAATA 1943 Query 142793 GCATCATAAAAACG 142806 ||||| || || || Sbjct 1944 GCATCGTAGAAGCG 1957 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 141428 GGAACTACTTGACGGAAATTACCTTCTTTAGATTCTTTAATACTTACTGGGCCACGAGGT 141487 || || ||||| || | | | || ||||| ||| ||||||| || | | ||||||||| Sbjct 570 GGTACGACTTGGCGAAGAATGCCATCTTTTGATGCTTTAATGCTGATATGACCACGAGGT 629 Query 141488 GGTTCAATACCATTTGTGCTATTTGAGACCTG-GCTGCTTGATTCGCATGGCATGAGTGC 141546 |||||||||||||| || || || | ||| | || || ||| | ||||| ||||| Sbjct 630 GGTTCAATACCATTGGTCGCGTTAGATATCTGCGATG-ATGTTTCAGAAGGCATCAGTGC 688 Query 141547 AGACAACGTTGAGTTACGAATTCCATGTTCTTTGAGTTCAGCTCGAAGTTCTTCCCAGTC 141606 ||| | || |||||||| | || | |||| | | | || |||||||||||||| Sbjct 689 AGATAGAGTAGAGTTACGTAGACCGTAGACTTTAATTGATTCGCGTAGTTCTTCCCAGTC 748 >seq66648 Length=2014 Score = 96.9 bits (106), Expect = 4e-15 Identities = 188/270 (70%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 133814 ACCTGAAGCAATTTCACGATGTGTCTGACTTTCAGTCGTACGGGCGCCAATAGCAACCCA 133873 ||| || || ||||||||||| || || ||| || || || || |||||||| ||| Sbjct 174 ACCAGAGGCCATTTCACGATGAGTTTGTGATTCTGTAGTGCGTGCTCCAATAGCTGACCA 233 Query 133874 TGAGAAAATACCAGAAAGATACTTAATCGTGAATGGGTCTAATACTTCAGTTGCTAATGG 133933 ||| | | | |||||||| | | || || | | ||||||| |||| ||| Sbjct 234 GCTGAAGAGATCGCCAAGATACTGAGGACTATTAGGATCCAGTGCTTCAGTAGCTAGTGG 293 Query 133934 AAGTCCCATACGTAGAAGTTTACGACACAATGTTCGTGCAACTAT-AAGACCGTGGTT-C 133991 ||||||||| | ||| || | || |||||||| ||| ||||| || || | Sbjct 294 AAGTCCCATCTCAACAAGATTCAATAATAACTGTCGTGCAA-TATGTAGACC-TGCTTCC 351 Query 133992 ATATCAAAACTTCCGTCAAGATATGGATCATTTA-CAAGACCTTTCCAACCTACGGTAGT 134050 ||||||||| | || | || |||||||| | |||| |||||||| || || ||||| Sbjct 352 ATATCAAAAGTGTTATCCATATTCGGATCATTAATCAAG-CCTTTCCAGCCAACAGTAGT 410 Query 134051 TCGAGGCTTTTCAAAATAAACGCGCATCAC 134080 || || |||||||| ||||| ||||| || Sbjct 411 ACGGGGTTTTTCAAAGTAAACTCGCATTAC 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540417745562240