Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_025446.1 Length=157308 Score E Sequences producing significant alignments: (Bits) Value seq66944 118 1e-21 seq66733 91.5 1e-13 >seq66944 Length=5658 Score = 118 bits (130), Expect = 1e-21 Identities = 271/400 (68%), Gaps = 16/400 (4%) Strand=Plus/Minus Query 4042 CCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTTCTT 4101 || ||||| ||||||||||| || || || || | ||||| |||||||| || || || Sbjct 1918 CCCACACCAATCATGTCCGGTGTACGCACACCTATTCGCCAGTTCAGTTCCTGCGTACTA 1859 Query 4102 ATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGT---ATTGTTGAT 4158 || | ||||||| | | || || || ||||| || | |||| ||||| | Sbjct 1858 ATTGAGTCCGGTGATAGCCTCGATTCGATTAATGCAACTTC---AAGTGCAATTGTGAAA 1802 Query 4159 TATGTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAGC 4218 ||||| ||| |||| ||||| || || || ||| ||| |||||||| | | || || Sbjct 1801 TATGTTTCCCAACGGGCTGGTATTGGCATTAATGCCGGTCGAATTCGTGCCTTGGGAAGT 1742 Query 4219 CCTATCCGAAAAGGTGAAATGGTGCACACAGGTCTGGTTCC--TTTCATAA--AATATCT 4274 | || || | || ||| | || || ||| || ||| ||| |||| | | || Sbjct 1741 TCGATACGTGACGGCGAAGCTTTTCATACGGGT-TGTATCCCATTTTATAAACACTTTCA 1683 Query 4275 GACTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAAC-TTGCT 4333 ||| ||| | || ||||| |||||||| ||| | || || || | ||||| | | Sbjct 1682 GAC---CGCAGTTAAATCTTGTTCTCAAGGTGGTGTACGCGGTGGTGCTGCAACACTATT 1626 Query 4334 ATATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTC 4393 ||| || || ||||| | || | || | | ||||| ||||||| |||||||| Sbjct 1625 CTAT-CCAATATGGCACTTGGAAGTGGAAAGTTTACTGGTCTTGAAGAATAACCGTGGCG 1567 Query 4394 TTGAAGAGAACCGTGAACGCCGTATCGACTATGGTATTCA 4433 | ||||| ||||||| || | || ||||||||| |||| Sbjct 1566 TAGAAGATAACCGTGTTCGTCACATGGACTATGGTGTTCA 1527 >seq66733 Length=2293 Score = 91.5 bits (100), Expect = 1e-13 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 76786 TTTGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAA 76845 ||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 630 TTTGGTGGCCCCAGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACACGCTCTAA 571 Query 76846 CC-ACTGAGCTACGGGGCCA 76864 || |||||||| ||||||| Sbjct 570 CCGTCTGAGCTATGGGGCCA 551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502836423714560