Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_026611.1 Length=43129 Score E Sequences producing significant alignments: (Bits) Value seq66866 392 9e-105 seq66899 159 1e-34 seq66755 150 5e-32 seq3939 123 7e-24 >seq66866 Length=3278 Score = 392 bits (434), Expect = 9e-105 Identities = 993/1493 (67%), Gaps = 38/1493 (3%) Strand=Plus/Plus Query 9869 AAGTTAACCGCAGACACCGCAGCTACCACGTCACCGGGCAGCGCACCAGTCACGATGA-- 9926 || || ||||| || | ||||| | | | ||||| || ||| | |||||| || Sbjct 1454 AAATTGACCGCTGATTCAGCAGCGATCTCCTCACCAGGG---GCAACGGTCACGCCGATT 1510 Query 9927 -CGGACATGATGAATAACGTCATCAACCTGAGCCAAGATTGGGTTCTGTTCTCATCCCTG 9985 |||||| |||| | | | || | |||| || ||||||||||| ||| || || ||| Sbjct 1511 GCGGACACGATGGAGAGCATCGTTAACCAGAATCAAGATTGGGTGCTGACGTCCTCACTG 1570 Query 9986 ATTGAGATGACCGATGATCAAAAACAAGAGCTGTGCGCATGGGTGAGTGCGTCAAATAAC 10045 | || | ||| || ||| ||||||| || ||||| || |||||| || Sbjct 1571 GTCGATTTTGAGGATACGCAGAAAAAAGAGCTCGCTGCTTGGGTAAGCCGGTCAAACAAT 1630 Query 10046 CGGTTTGGCTATGTCGTGCATGACCCTTCACAGTCCGCCACCGTTGCCAATAACGCGCAG 10105 || ||||||||||| || || || |||||||||| || |||||| | | Sbjct 1631 CGCTTTGGCTATGTTTATCACGATGAATCCGCTGCCGCCACCGTAGCGAATAACTCATCG 1690 Query 10106 TGCTTCATGCAGAAGGTTGTCGTAGCAAACGGCTATGAAAACGTGTTCCCGGTGTATGGC 10165 || ||| || ||||| || |||||||| ||||||||| | |||||| ||| Sbjct 1691 ACTTTTCAACAGTCAGTAGTCGTTGCCAACGGCTACGAAAACGTGATGGCGGTGTTTGGT 1750 Query 10166 TCCTATTTGTACGCGATTCCCGCGCTGGCATATGCCGCATCGCTGGATTTTGCGCGCACT 10225 ||||| || ||||| | | |||||||| || |||| |||||| ||||| | || || Sbjct 1751 TCCTACTTATACGCTGTGCTGGCGCTGGCCTACTCCGCCTCGCTGAATTTTACACGTACC 1810 Query 10226 AATGGCCGGGTTTCCTACAAGTTCCGCGACTTCCCCGGCCTGGCTCCGAACGTTACCGAC 10285 || || || || ||||||||||| ||| || | || || || |||||||| | || Sbjct 1811 AACGGTCGTGTCTCCTACAAGTTTCGCTCGTTTTCGGGGCTAGCACCGAACGTCAGTGAT 1870 Query 10286 GGGCAGACCTATAGCG----CGTTGCTCTCCAATGGTTACAACTTCTACGGCTCCTATAG 10341 | ||| ||| || || ||||| || ||||||| ||||||| | ||||| Sbjct 1871 ----AATGCTACTGCGTCTGCGCTGGAGTCCAACGGCTACAACTACTACGGCGCGTATAG 1926 Query 10342 CCTGAATAAGACCATGAAGCAATACGC-ATCGAATGGTGCGATCACGGGTAAATTCGAGT 10400 | |||||||| |||| || || | | ||| || ||||| || |||| | | Sbjct 1927 TCAAAATAAGACGTTGAAACAGTATGTGAGCGACGGGAA-GATCAGCGGAAAATATCAAT 1985 Query 10401 GGCTGGACACCTTCATGTGCCAGGTGTGGATGAACGCAAATCTGGTAGGCTCGTTTGCCA 10460 ||||||| | |||||| | ||||| ||||| ||||| |||||||| | || |||| Sbjct 1986 GGCTGGATAGCTTCATTAGTCAGGTTTGGATCAACGCCAATCTGGTCACTGCTTTCGCCA 2045 Query 10461 ACCTGTTCACCGCCAATCAGTCCTATCCGTTTAACGCCCAGGGCTATGCGGCTGTTAATG 10520 | | || || ||| || ||| |||| || ||| ||| || || || || | Sbjct 2046 ATTTATTTACTAATAATGCCTCTTATGCGTTCAATGCCACGGGTTACGCAGCGGTCTCCG 2105 Query 10521 CTGCCGTGATCGACGTGGCACAGCAGGCGCTCAACTTCGGTGCCATCCGCAAGGGTGTAC 10580 |||||||||| || || || || || ||||| || ||||||||| || || Sbjct 2106 CTGCCGTGATTGAGGTCGCTTCGCGAGCTAAAAACTTTGGGGCCATCCGCGCAGGCGTCA 2165 Query 10581 CGCTGGACGCCGCGCAGATCCGCGTCATCAACAACACGGTAGGCGCCGATATCTCCAGCA 10640 | | ||| | |||||||| | | || | |||| ||||| | ||| Sbjct 2166 CCTTAGACCCGGCGCAGATTAAACTGGTTAATGATGCGGTGAAATCCGATGTTGAGAGCG 2225 Query 10641 CGCTGTACTCCGAGGGGTGGTATCTGTACATCCCGCCGCAACCGGGCTCTAACCGCATCG 10700 |||||| |||| || ||||| | || || ||||| || || |||| | | Sbjct 2226 TGCTGTATACCGATGGTTGGTACTTTTATATTCCGCCCCAGAACAGCCAAGACCGGACAG 2285 Query 10701 AGCGCGACCTGAAGGGCGTGATTTTTTACTACGTCGATGGCGGACTGATCCAAAGCATCA 10760 ||||| ||| | || | |||||||| || || ||||| | |||||| |||||| Sbjct 2286 AGCGCATACTGCAAGGGGCTATTTTTTATTATGTTGATGGTCAGTTAATCCAACGCATCA 2345 Query 10761 CGATGTCTTCAACCGCTATCCTGTAAGGACGACATAATGCCTCTCGATATCACAAGCGCC 10820 | ||| || | ||| ||||||||| | ||||| |||| || || || || Sbjct 2346 GCTTAAATTCCACGGATATTCTGTAAGGATTAATCGATGCCAATCGACATTACGAGTGCG 2405 Query 10821 AATTCCAAGCTGCGTCTCGTCGTCCCTGCCTATTACCCTGGTGGGATTGATGTTGACGAC 10880 || |||| || | | |||||||||||| ||| || || || | ||||| |||||| Sbjct 2406 AACGCCAAATTGAGCATTGTCGTCCCTGCCCTTTATCCCGGCGGTTTCGATGTCGACGAC 2465 Query 10881 TACGCGGCCGACAACATGTTTGACACTGCGCCATTGCAGAACGCCGAAGAAATCATGTCG 10940 ||||| || || | |||||||| | | | || || ||||||||||| || |||||| Sbjct 2466 TACGCCGCGGAAGATATGTTTGAAGCCGGCGCGTTACAAAACGCCGAAGATATGATGTCG 2525 Query 10941 GCCGACGGCAAATACCACGCCGGTTTCGTGTTCAACCCGGCAGACTTTACGATTACCCTG 11000 || ||||||||||||||||| ||||| || ||||| || || | || || | || Sbjct 2526 GCAGACGGCAAATACCACGCGGGTTTTGTTTTCAATGCGCAGGAACTGACCATCAATCTC 2585 Query 11001 ATGCCGACATCATCAGCTTTGGGGAAACTGGAAGATA--TGGT-TGCGGCGGAGCGAACG 11057 ||| | || || ||| || ||| |||| |||| ||| || || || ||| Sbjct 2586 ATGGCTACCTCGCAAGC---AGGACGGCTGATTGATAACTGGTATGCCGCCGAACGCACG 2642 Query 11058 GCGATCGCCAAGTTCGTGGTAAACGCTACCCTGGTAGTCCCATCTCTCAACAAA--AAGT 11115 |||||| |||||| | ||||| ||||| | | ||| || |||| || | Sbjct 2643 GCGATCAGCAAGTTTGCCTGTAACGCCACCCTAATCAT--CATGCCTTTGCAAACTAAAT 2700 Query 11116 GGACGATGGTAAACGGGGTGCTGTTCAGCATG--CCTCCGCTGCCGCCGGGACGCCGCAT 11173 | | || ||||| ||||||| || | || ||||| | ||| || || ||||| Sbjct 2701 ACAATTTTGTCAACGGCGTGCTGTACA-CTTGGACCTCCAC-GCCACCCGGTAAGCGCAT 2758 Query 11174 CCTTCAGCCGCGCCCCGTCGTATTCCATTTTGAAACCACTACACCGAGTGCCGTCTAATG 11233 ||||||||||| |||| |||||||| ||||||||| || ||||| ||| ||||| Sbjct 2759 TCTTCAGCCGCGTCCCGCGGTATTCCACTTTGAAACCGTCACCGCGAGTCCCGCATAATG 2818 Query 11234 ---AGAAAGCAGATCACCTACATCGTCGAAGATAACAACCGCGATCGCGGGAAAG-AGTT 11289 ||||| ||||||| || | ||||| || || || || |||| | || Sbjct 2819 AGTAGAAAAACCATCACCTTCACTGCCGAAG---ACGGACGAGACAAAGGAAAAGTATTT 2875 Query 11290 CATTATCACGGAAATGTCGGCATGGGATGCTGACGAGTTATCGCAAGAGATTT 11342 || || || ||||||||||| ||||||||||| ||||| | |||| |||| Sbjct 2876 CA-AATAACAGAAATGTCGGCGTGGGATGCTGAGGAGTTGGCAGAAGACATTT 2927 >seq66899 Length=3725 Score = 159 bits (176), Expect = 1e-34 Identities = 579/895 (65%), Gaps = 21/895 (2%) Strand=Plus/Minus Query 18908 ACACGCCAGACGCGCGGAACGCTGCTCGTTACGGATAAAGACGGCAATCAATCACAGGTT 18967 || || |||| ||||| || | | | | || ||||| | ||| || |||| |||||| Sbjct 1074 ACCCGACAGATACGCGGTACCATTCGCATAACCGATAATCAAGGCGATGAATCGCAGGTT 1015 Query 18968 ACGATATGACG-AATTTAACAACGGCAGTACCGGACGTAACCATTACCGAGAATGGCCTA 19026 | |||||| || |||| ||| || || || | ||| |||||||| | || ||||||| Sbjct 1014 GCTCTATGACCCAACTTAA-AACAGCGGTGCCCGGCGTCACCATTACGGCGACTGGCCTA 956 Query 19027 TTAGTCCCGGACGTGGCTGATATCCTAGCCGGCCGGCTAACTGACATGTCTACCTCTCT- 19085 | ||||| || | |||||| | || | || || |||| || | | || | | Sbjct 955 CTTGTCCCCGATATTGCTGATGTTTTATCGGGTCGATTAACCGATTTCGATGCCGCAATG 896 Query 19086 --CGGGGGCGGTAGTGAGTCGCTAAGCTCTCCGCAGGGGCAACTGGCACAGTCCGATACA 19143 ||| |||||||| ||||||| || || || || || | ||||| |||||||| Sbjct 895 GGCGGTGGCGGTAGCCAGTCGCTTTCTTCGCCACAAGGCCAGATAGCACAATCCGATACT 836 Query 19144 GAGATTGTCGCTCAGGTGTACGACAAGCTGCTCTGTCTGTTCAACCAGATGAACCCTGAT 19203 || || | ||| ||||| |||| | || || |||||||||||||| || || Sbjct 835 GAAATCCTTGCTACTACCTACGATGCGCTGTTGTGCCTCTTCAACCAGATGAATCCGGAC 776 Query 19204 TTTGCTGAAGGCAGATTTCAGGATGGGATCGGGCGCCTCTACTTCCAGGATAGGATTTCC 19263 | ||| || | | || || || || || | ||||| ||| ||| | |||| Sbjct 775 TACGCTACGGGGCGCTGGCAAGACGGTATTGGCAGACTCTATTTCATGGAACGTCTTTCG 716 Query 19264 GCCCAGGGAACCATCGTTACGGCGACATGCGTCGGGGCCGTCGGCACGCTTATCCCTGCC 19323 || || || | || || || || ||| ||| || || |||||| ||||| || Sbjct 715 GCGAGAGGGACGGTGGTGACTGCTACCTGCACCGGCGCGGTGGGCACGGAGATCCCCGCT 656 Query 19324 GGAAGTAGCGCCCAGGATAATGCAGGATACATTTACCGCAGCATTAATGACGCCACCATC 19383 || || | ||| |||||| | ||||| |||| || ||| | | |||||||| Sbjct 655 GGCAGCACCGCACAGGATGAGGCAGGTTACACCTATGCTTCCATCAGCGCTGCCACCAT- 597 Query 19384 CCGGCATCA--GGATCGGTAGAGGTGCAGTTTCAGAACGTCACACCCGGCCCCATCCCAT 19441 ||| || ||| ||| | | |||| || ||| ||| | || || || || | Sbjct 596 -TGGCCCCAGTGGACAGGTGGCCCTTGAGTTCCAAAACCAGACAACAGGACCGATTCCGT 538 Query 19442 GTGGTGTTGGCGAACTAAATCAAGTCTATCGAGCGGTGTCCGGTTGGGACACGGTATACA 19501 | |||||||| | ||||||| | | | | || || || ||||| | || || Sbjct 537 GCGGTGTTGGTCACTTAAATCAGATATTTGTCCCAGTTTCTGGATGGGATTCCATAACCA 478 Query 19502 ACCAGGCTGCCGGTGTTGTTGGCGTTGATGTGGAGTCGCGCATTGCGTTTGAGGCTCGCC 19561 | | || || || || | || || | || || || || |||| ||||| | || | Sbjct 477 ATGAAGCAGCGGGCTTTCTCGGTATTAACGTCGAATCTCGGCTTGCTTTTGAAACCCGGC 418 Query 19562 GTAAGGAATCCGTAGCCAGAGGTGGAGC---AAATACCGACGCCGCCACCCGCGCCGCCG 19618 ||||| | |||||||| | | ||||| |||||||| ||| | || | ||| || Sbjct 417 GTAAGCAGTCCGTAGC---ACGGGGAGCGTGTAATACCGATGCCTCTACTCTCGCTGCGC 361 Query 19619 TTCT--GGACGTTACGGGCGTTGCTGATGCCTATGTTTGGTCTAACCG-GCTATCCACTC 19675 |||| ||| | | | ||| |||||||| || ||||| ||||| | ||| Sbjct 360 TTCTAGCGACTGAAGGAGTATTG--GATGCCTACGTCTGGTCAAACCGAACGGACCAAGT 303 Query 19676 CAGTAAACAAGGGATCGACTAACTTTCCTGTAGCCGGTAACTCCATCTACATCGGTGTTT 19735 ||||| |||||||||| | | ||| ||| | | | || |||| |||| || | Sbjct 302 GGTTAAAC-TGGGATCGACTGATTATCCGGTAACAGCGCATTCTCTCTATGTCGGCGTCT 244 Query 19736 ATGGCGGTCTGGATGCAGGTGTGGCGGCGGCCATTTTCTCAAAATACAACCTGGG 19790 |||||| ||||||| |||||| | || || ||| | | | | |||| ||| Sbjct 243 TCGGCGGTACTGATGCAGAGGTGGCGACCGCGATATTCGCCACAAAAAACCCGGG 189 >seq66755 Length=2405 Score = 150 bits (166), Expect = 5e-32 Identities = 546/850 (64%), Gaps = 11/850 (1%) Strand=Plus/Plus Query 20195 TATGACATGGAAAGAGACGATATTAACTCAGTATTCAGCAAGTAAATCACTTCTCTCTAT 20254 |||||| |||||| | || || | || ||||| ||||| || || || || |||| Sbjct 280 TATGACTTGGAAACACACTATCCTCACCCAGTACTCAGCCAGCGAACGCCTGCTGGCTAT 339 Query 20255 TATCGACACTTTCAACCAAGCTGTAAGCCTGGATGATTTCACTGATGAATTCATCGATCG 20314 ||| || ||||| | || ||||| |||| |||||||| || |||||||||||| | Sbjct 340 TATTGATACTTTTCAACAGGCTGTCTGCCTAGATGATTTTACCGATGAATTCATCAAGGC 399 Query 20315 GGTTTGGGATTTGACTACATGCGATACCTTTGGTTTGGATATGTGGGGAAAGAAAGTTG- 20373 ||| ||| | | ||| || | || ||||| | |||| ||||| |||||| | Sbjct 400 GGTGTGGAACGTCGATACTTGTGGAACTGTTGGTCTAGATAGATGGGG---GAAAGTCGT 456 Query 20374 --GCGCACCTCGCTATATCAAGGCCTCCATAGACTCTGATAGCTTTGGGTTTTATGAGGC 20431 || | | ||||| | ||| ||| | || || || ||||| |||| || || Sbjct 457 CAACGTTTCGAGATATATACAAGCCAACATCAATTCGGACAGTTTTGGATTTTCCGAAGC 516 Query 20432 CAATGACAGTGGAGATGGATACCCAAACCCATTTAATGACCAACCATTTTACGCTGGCGT 20491 || |||| | | || ||| || ||||| || || |||||||| || ||| | Sbjct 517 ---GGAGGGTGGTCAAGCGTATCCATCGCCTTTTAACGATCAGCCATTTTATGCGGGCAT 573 Query 20492 GCAGGAAACGGAGACGGTAAGACTATCCAACAACGCTTATCGAACGCTTATTTTTTGCAA 20551 ||||||||||| || || ||||| | | | || ||||| || || | | ||| Sbjct 574 ACAGGAAACGGAAACCGTTAGACTGGGCGATGATGCCTATCGTACCCTCGTGCTAGCCAA 633 Query 20552 AGCATTCTCAAATATTAGCATTGCAACAATACCTGATGTAAATAGGTTTTTGACAATGCT 20611 || || | ||||||||| | || || || | || |||| | || | | || | Sbjct 634 GGCCTTTGCCAATATTAGCCTCGCCACCATCACCGAAATAAACCGCTTCCTCTCTCTGTT 693 Query 20612 ATTCAAGGGGCGCGGAAGGTGC-TATTGCATAAATTACAAAGAAATGACAATGGGGATAA 20670 ||||||||| | || |||| | |||||| ||||| || |||| ||||| || Sbjct 694 ATTCAAGGGTAGAGG-GCGTGCTTTTTGCATTGATTACGGCGAGATGAAGATGGGCATCG 752 Query 20671 CGTTTGAGTTCCATCTTGAACCCTTTGAAATTTCAATTTTACAAAACTATGAAGTCACCC 20730 || || || |||| | |||| |||| | || || | || || |||| | Sbjct 753 TGTGCGAATTTGATCTAGCGCCCTACGAAAAAGCTATCCTAGAGAATGATCAAGTGCTAC 812 Query 20731 CAATCCCCAGTGGAGTGCTTTTAAGAATAAATCAAATAGTTCCACCATATTTTGGTTTTA 20790 | || || || || || | | | || || | | | ||| | ||||| |||||| Sbjct 813 CCATTCCTAGCGGCGTTTTGCTCACCATTAACCCTACGGATCCCACTTATTTCGGTTTTG 872 Query 20791 CAGAAGAAGCCTATCCGTTTAATGACGGAACATTTTATAGAGGTTGATAATGAAGATTGT 20850 | || |||||||| || || ||||| || |||| | ||| ||||||| | Sbjct 873 CGCCCGACGCCTATCCCTTCAACGACGGTACCTTTTTTCGAGAAATTTAATGAACAAAAC 932 Query 20851 CGATTCACCAGCAAAACAAGGCGTACCCTTTGGCATAAATGGCTTGCGAGAGCCGCTTCT 20910 || |||| |||||| | || || |||| || || || ||| | | Sbjct 933 AGACGAACCAAAAAAACAGGCGGTCCCTTTTGCCAGCCGAGGACAACGCGAGGAATTATT 992 Query 20911 TCCATCAACTCCAGCTGGAGATAATGCCGCATCATATGCCGATGGTTTTCCATCAATCAC 20970 || || ||| |||| || ||| ||| || |||| || ||||| | ||||| Sbjct 993 GGCAAATACGCCATCTGGCGACAATAGCGCCTCCTATGATTTAGGATTTCCGCCGATCAC 1052 Query 20971 GATGATCTTGAAGTCTGCCGGCGGCCTTCCCCCGAAAGGTCAGGACATGAACCAAGTGCT 21030 ||||| || ||| | || ||||| || || |||||||| || ||||||||||| | | Sbjct 1053 CATGATTTTAAAGGCGGCAGGCGGGCTGCCTCCGAAAGGCCAAGACATGAACCAGATTTT 1112 Query 21031 TTTTGAGCTG 21040 | ||||||| Sbjct 1113 ATATGAGCTG 1122 >seq3939 Length=2233 Score = 123 bits (136), Expect = 7e-24 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 617 TTCTGGACGACGCAGGCGCGAAACAAGATTCTGTACGGTGGTCGGGCAAGCTCCAAATCA 676 |||||||||||| |||||| || ||| |||| |||||||| || | || || ||| Sbjct 2073 TTCTGGACGACGAGGGCGCGGAATAAGGTTCTCTACGGTGGCCGCACCTCGTCGAAGTCA 2132 Query 677 TGGGATGCCGCCGGGTTCGCCATCTACCTTGCCAACAACTACAAGCTTCGTTTTCTATGC 736 |||||||| || || || || || | ||||||| | |||||| ||| || || || ||| Sbjct 2133 TGGGATGCAGCGGGCTTTGCGATATTCCTTGCCGATAACTACCGGCTGCGCTTCCTCTGC 2192 Query 737 GCTCGCCAGATACAGAACAAGATAGCCGAGTCCGTCTATGC 777 | |||||||||||||||||||| | || || |||||||| Sbjct 2193 ACACGCCAGATACAGAACAAGATTGAGGAATCGGTCTATGC 2233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137781568911984