Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq44371 156 4e-33 seq25273 98.7 1e-15 >seq44371 Length=3624 Score = 156 bits (172), Expect = 4e-33 Identities = 177/232 (76%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GC 134544 |||||||||||| ||||| || || || | ||| ||||||||||||||||| || || || Sbjct 1094 TCCTCCTCTGAGACGCAATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGC 1153 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| ||| | ||| || | |||||||| || ||||| || || ||||| || || | Sbjct 1154 CAA-GGTTCGTCCGTCTTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTG 1212 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCC 134663 | || ||||| || ||||||| | || | || | | || |||| || || || | ||| Sbjct 1213 GAATTCCTTCCTTGTCTTGAA-TCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCA 1271 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715 || || || || ||||||||||| || | ||||||||| ||||||||||||| Sbjct 1272 ACCTCAAGTGTGATGGTTTTACCCGTAAGAGTTTTAACAAAAATTTGCATTT 1323 >seq25273 Length=2210 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || |||||||| |||||||||||| | || | || || | || Sbjct 1990 GTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGCACGGCCATCTTCCAATTG 2049 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || ||||| ||||| || ||||| || || ||||||||||| ||||| ||||| Sbjct 2050 CTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGAATGCCTTCTTTATCTTGGATTTT 2109 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || || | ||||| | | || || || | || |||||||| || || Sbjct 2110 AGCCTTTACGTTCTCGATAGTGTCACATGGCTCGACTTCCAAGGTGATGGTTTTGCCAGT 2169 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| |||||||| Sbjct 2170 CAAAGTCTTCACGAAGATTTGCAT 2193 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | ||| | || || || |||||||| || ||||| |||||| | Sbjct 1739 CCTCCGCGAAGACGAAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCT 1798 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || ||||| ||||| ||||| || ||||| |||||||| || || Sbjct 1799 AGAGTACGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGA 1858 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || || || || | || ||||| | || || Sbjct 1859 ATACCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACT 1918 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || || || || || || || || ||||||||||| Sbjct 1919 TCTAAAGTGATAGTCTTGCCTGTCAATGTCTTGACAAAAATTTGCAT 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504975432079040