Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq44017 165 1e-35 >seq44017 Length=1387 Score = 165 bits (182), Expect = 1e-35 Identities = 284/410 (69%), Gaps = 3/410 (1%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || ||||| ||||||| ||| ||||| || ||||| ||||| |||| || || ||| Sbjct 410 GCCGGTTTGGTACGTAAATAATACATGCCAGTTTTGAGACCCGCCTTCCAACCATAAAAA 351 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || ||| |||||| ||| ||| |||| || |||| ||| ||||| | |||||||||| Sbjct 350 TGTATAGATGTTAGCTTGCCATAGTTTGGTTCAGCTACATGTATATTAAACGATTGACTT 291 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCC 68574 ||||| || || || || | ||| || ||||| || || || |||| | |||||| Sbjct 290 TGATCAATAAACGCGCCACGATCAGCGGCCATCTTCATTGTAGTCTTCACCGATATTTCC 231 Query 68575 CAAATAGTCTTAAAAATCTGTTTGATATCATCTGG--AAGGCTC-GTATTTTGAATGGAT 68631 || | |||||| ||| | || | | ||| || || || ||| || || Sbjct 230 CACACAGTCTTGTAAAGTTCACGTATTTTTTGTGGTATAGATTCAATACCTTGTATTGAA 171 Query 68632 CCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAA 68691 |||| | || ||||||| || | || || || |||| |||||| || || | | Sbjct 170 CCACGACTGGTTATAATTTTAGTTTTCATTTCTTCATCCCACAAACCCAATTCGGTAAGA 111 Query 68692 ACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAA 68751 | | | | ||| ||||||| | ||||||||| || || | || | |||| | ||| Sbjct 110 TCGCGCAACAAATGATGATTAACAACTTGAAATTCGCCCGAAAGTACGCGACGATTATAA 51 Query 68752 ATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGC 68801 || ||| ||||| ||||| | |||||||||||| |||| |||||| || Sbjct 50 ATGTTAGAAGTATAAGGTTCAAAAGATTCATTATTGCCCATAATTTGTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686333926025280