Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq66944 178 1e-39 >seq66944 Length=5658 Score = 178 bits (196), Expect = 1e-39 Identities = 329/477 (69%), Gaps = 13/477 (3%) Strand=Plus/Plus Query 143117 CATCAGGTCGTTGATTTGAAGACCATAGTCCAGGTGACGAATTCGGTTTTCATCTACGCC 143176 |||||| | || | ||||| ||||||||||| |||||||| ||||| || |||||||| Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 143177 TTTGTTGTTCTTAAGTACGAGGAGATTCTCGACTTCAAGATGCCAAATTGGATAGTACAA 143236 ||| ||||| | || || | | | || ||||| | ||||| ||||||||| | | Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 143237 TGTTGCGGCACCACCACGAACTCCGCCTTGGGAACAGGATTTAACTGCAGTTTGGAAGTG 143296 |||||| |||||||| || || || ||||| ||||| ||||||||||| || || ||||| Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 143297 TTTCCAGAAAGGAATAACTCCAGTATGCTTGACTTCACCGTTTCCGATTTTTGAACCTTC 143356 ||| | || || ||| || ||||| |||| |||| | | | |||| | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCGT---CACGTATCGAACTTCC 1747 Query 143357 ---TGCACGCAACATCCCCGCGTTAATGCCAATACCTGCACGCTTACTGATATACTCAAT 143413 ||||| | || || |||||||||||||| || || | | ||| | | Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 143414 AATGCTTGCAC-TGGCTTTG--TTAATTGACTTAAGTGAGTCACCAGCTTCAATAACAAC 143470 || |||||| || ||| ||||| || | || ||||| | ||||| | || Sbjct 1808 AA---TTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTAC 1864 Query 143471 ACAAGAGCTAAACTGACGAGTCGGTGTACGAGCCCCGGCCATAATTGGAGTAGGCAAAGA 143530 || || || ||||| ||| | ||||| || | |||| ||| ||||| || |||||||| Sbjct 1865 GCAGGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGA 1924 Query 143531 AATTTGACGAGTAGATACGGCGTCATAAAAACGAATTACGTGCGCCAGGCG-GTTTT 143586 ||||| | ||| || | || || || || || |||| | | ||||| ||||| Sbjct 1925 AATTTTAAAAGTTGAAATAGCATCGTAGAAGCGCTTTACATAATCGAGGCGAGTTTT 1981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544507120297920