Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_027344.1 Length=158099 Score E Sequences producing significant alignments: (Bits) Value seq66944 174 2e-38 seq66733 107 2e-18 >seq66944 Length=5658 Score = 174 bits (192), Expect = 2e-38 Identities = 313/453 (69%), Gaps = 12/453 (3%) Strand=Plus/Plus Query 14834 CATCAAATCATTGATTTGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACC 14893 ||||| | ||| | ||| | ||| || || | ||||||| ||||| || ||||| || Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 14894 TTTGTTGTTCTTTAATACCAAAAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAG 14953 ||| ||||| || |||| | |||| || || | ||||| |||||||| | || Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 14954 AGTAGCTGCACCACCACGGACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATG 15013 || || |||||||| || ||||| ||||||||||||||||| ||||| |||||||| || Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 15014 TTTCCAGAAAGGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTC 15073 ||| | || || || || ||||| ||||||| | || | | || | | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCGT---CACGTATCGAACTTCC 1747 Query 15074 ---AGCTCGAATCATACCGGCGTTGATGCCTATACCAGCTCGCTTGCTGATATACTTAAT 15130 || ||||| |||||| || ||||| |||||||| || | | | ||| || | Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 15131 AATACTGTTACTT---GCTGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTAC 15187 ||| || |||| | ||||||||| |||| || ||| || | ||||| | ||| Sbjct 1808 AAT--TG-CACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTAC 1864 Query 15188 ACAAGAACTAAACTGACGAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGA 15247 || ||||| ||||| ||| |||| || || | || | ||| || ||||| ||||| || Sbjct 1865 GCAGGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGA 1924 Query 15248 AATCTGTCGAGTAGATACAGCGTCATAAAAGCG 15280 ||| | ||| || | ||| || || ||||| Sbjct 1925 AATTTTAAAAGTTGAAATAGCATCGTAGAAGCG 1957 >seq66733 Length=2293 Score = 107 bits (118), Expect = 2e-18 Identities = 72/79 (91%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 103766 TTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAA 103825 |||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 630 TTTGGTGGCCCCAGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACACGCTCTAA 571 Query 103826 CC-ACTGAGCTAAGGGGCC 103843 || |||||||| |||||| Sbjct 570 CCGTCTGAGCTATGGGGCC 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505365505353280