Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq66944 125 2e-23 >seq66944 Length=5658 Score = 125 bits (138), Expect = 2e-23 Identities = 270/401 (67%), Gaps = 7/401 (2%) Strand=Plus/Plus Query 259778 TTGCA-TGGTCAATATTTTGAATATAGATACGCCCAGTTTCAGCACGCTCAG---TCATT 259833 ||||| ||||||| || || ||||| ||||| || ||| || || || ||||| Sbjct 1278 TTGCAGTGGTCAACGTTCTGGATATATATACGACCGGTTGATGCGCGTTCTTGCATCATT 1337 Query 259834 AAAGTACTGAATACTTCAACAGCAGGTACGGATTTTTTACGGATGCTTTGGTCAGCTTCG 259893 || | | |||| |||| || || || ||| |||||| | | | ||| Sbjct 1338 AATGAA---AATAGGTCAATGGCTTTTAAACTTTGTTTTCGGATGTTGTCATTTTTTTCA 1394 Query 259894 TATTTTTTATATAACTTTTCAAATTCTTTTTGATCAGAGCAGAATGCTTCATATAGCCCA 259953 |||||| |||| | ||||||||||| ||||||| ||||||| || ||||| || Sbjct 1395 TATTTTGTATACAGGAGTTCAAATTCTTCCTGATCAGCAAAGAATGCATCGTATAGACCT 1454 Query 259954 GGGACTTCATTAGGACTAAAGAATGTAATATTCTTTCCATCAACCAAACGTTGATACAAA 260013 || || || |||||||| | ||||||| |||| | | | || ||||||| Sbjct 1455 GGCACATCTGACGGACTAAATAGAGTAATATCTCTTCCCTGGAGTAGGCGCTGATACATC 1514 Query 260014 GTTTTGTTTACTTGGAAACAATAGTCCAGTTGACGCACACGGTTAAACTCAGTACCTTTG 260073 ||| || | ||| | || |||||||| ||||| ||||||||| || || | Sbjct 1515 AGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGG 1574 Query 260074 TTATTTTTAAGGACTACCAAGTTATCAAATTCCAAATGCCACAATGGGAAGTGAACAGTT 260133 ||||| || | ||| | || | || | |||||| ||||| | ||| || | ||| Sbjct 1575 TTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTT 1634 Query 260134 GCTGCACCACCACGAACACCACCTTGTGAACAGCTTTTAAC 260174 || |||||||| || ||||||||||| ||||| |||||| Sbjct 1635 GCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAAC 1675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1112874931221696