Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq66910 140 8e-29 >seq66910 Length=3982 Score = 140 bits (154), Expect = 8e-29 Identities = 292/427 (68%), Gaps = 16/427 (4%) Strand=Plus/Plus Query 705 TTCATGTTCTACGGCATCAAAAACAACCCGACGAAGATTAAATCGCTCGAAGGCATTGAT 764 ||||| || | ||||| ||||| ||| || || ||||||||| | ||||| | | | Sbjct 435 TTCATTTTTTCGGGCATTAAAAATAACGTAACCAAAATTAAATCGATTCAAGGCGTGGGT 494 Query 765 ATCTGCTGGGTGGAAGAAGCGGAAGCGGTAACGAAGGAATCATGGGATATCCTGATACCA 824 || |||||||| |||||||| |||||||| || ||||| || ||||| | |||||||| Sbjct 495 ATTTGCTGGGTAGAAGAAGCCGAAGCGGTCACTAAGGATTCTTGGGAGGTACTGATACCG 554 Query 825 ACCATCCGCAAGCCGTT-----TTCCGAAATATGGGTGAGCTTTAACCCTAAGAACATCC 879 | ||||| | | | | | ||||| ||||| || || ||||| || || || | Sbjct 555 TCTATCCGTGGG--GATAAACATGCGGAAATTTGGGTTAGTTTCAACCCGAAAAATATTC 612 Query 880 TCGACGATACCTATCAGCGATTCGTCGTAAATCCTCCTGATGATATTTGTCTGCTGACGG 939 | || |||||||||||||| ||| |||| ||||| ||| || | | |||| || Sbjct 613 TTGATGATACCTATCAGCGTTTCATCGTTAATCCGCCTAGTGGCGCCATTGTACTGAAGG 672 Query 940 TGAACTACACCGACAACCCGCACTTTCCTGAAGTTCTCCGTCTGG----AGATGGAAGAG 995 ||| ||| | |||| ||| | |||| | | | || || | |||||| | Sbjct 673 CGAATTACTACCACAATCCGTA-TTTCGACCAATCCCCCCTCCCGGCTCAGATGGCGGCC 731 Query 996 TG-CAAACGCAGAAATCCGACACTGTATCGTCACATCTGGCTGGGTGAGCCGGTAAGCGC 1054 || ||| || | | || || ||||| || |||||| ||| |||||||| ||| Sbjct 732 TGTAAAAAGCGGGACGATGA-TCTCTATCGGCATATCTGGGAGGGAGAGCCGGT-CGCGG 789 Query 1055 A-AGTGATATGGCAATCATCAAACGTGAATGGCTTGAAGCTGCAACCGATGCACACAAGA 1113 | ||||| ||||| || ||||||| ||| ||| || || | |||||| || || Sbjct 790 ATAGTGAGATGGCGATTATCAAACCCTCGTGGATTGCGGCAGCTATCGATGCCCATCTGA 849 Query 1114 AACTCGG 1120 || |||| Sbjct 850 AAATCGG 856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123754330212096