Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq25273 100 2e-16 >seq25273 Length=2210 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| || | ||||| || | ||||| || ||||| || ||||||||| | Sbjct 1967 CCACCACGCAAGCGGAGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGAC 2026 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| | || || || ||| |||| | ||| |||||||| || || Sbjct 2027 AAGGCACGGCCATCTTCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGA 2086 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199 | || |||||||| ||| || || | | | || | |||||| ||||| | || Sbjct 2087 ATGCCTTCTTTATCTTGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCT-CGAC 2145 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| | || || | |||||| |||| ||| ||||| |||||||||||| Sbjct 2146 TTCCAAGGTGATGGTTTTGCCAGTCAAAGTCTTCACGAAGATTTGCATA 2194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424587663090624