Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq66646 122 8e-23 seq66893 84.2 2e-11 >seq66646 Length=2004 Score = 122 bits (134), Expect = 8e-23 Identities = 184/261 (70%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 58077 GCACGCTACAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAA 58136 ||||| |||||||||||||||| || || ||||| || || ||||| | || || || | Sbjct 204 GCACGTTACAGCTGATTAAAGAGCATGGATGTAAGGCTGGACTGGTGCTAAATCCAGCTA 263 Query 58137 CGCCGCTCAGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCG 58196 | || || | | ||| ||||| || ||||| || || ||||| || || ||||||| | Sbjct 264 CTCCACTAACTATTCTTGATTATGTGATGGATAAGCTAGATGTAATACTTTTGATGTCGG 323 Query 58197 TGAACCCAGGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAG 58256 | || |||||||| | | || || |||||||| || ||| ||||| | || ||| Sbjct 324 TTAATCCAGGCTTTAGTAGTCAATCGTTTATTCCCGGTACACTGAATAAATTACGTCAAG 383 Query 58257 TGCGTCGCCGCATTGATGCGTC----CGGTTACGACATTCGCCTGGAAGTGGACGGCGGC 58312 | || |||| | || ||| || || ||| | |||||||| |||||||| Sbjct 384 TATGT----AAATTGGTCGATCAAAGCGGCTATGATATTTGTCTGGAAGTTGACGGCGGT 439 Query 58313 GTGAAGGTGAACAATATCGGC 58333 ||||| || | ||||| ||| Sbjct 440 GTGAAAGTCGATAATATTGGC 460 >seq66893 Length=3550 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 59615 ATGCACCCTTAGTTCAATTGGATAGAGCAACGGTCTTCTAAATCGTTAGTTACAGGTTCG 59674 |||| ||||||| ||| |||||||||||| | | ||||||| ||| || ||||||||| Sbjct 1639 ATGCGCCCTTAGCTCAGTTGGATAGAGCACCAGCCTTCTAAGCCGTAGGTCACAGGTTCG 1698 Query 59675 AATCCTGTAGGGTGTACCA 59693 |||||||||||| | |||| Sbjct 1699 AATCCTGTAGGGCGCACCA 1717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470847217904960