Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28]
66,952 sequences; 97,281,263 total letters
Query= NC_027995.1
Length=41666
Score E
Sequences producing significant alignments: (Bits) Value
seq66707 138 3e-28
seq65974 84.2 6e-12
>seq66707
Length=2212
Score = 138 bits (152), Expect = 3e-28
Identities = 206/287 (72%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 41172 AACAAAGTAGAAATCATTGGCAA-CTTAGGCAACGATCCAGAAATCCGTTACATGCCAAG 41230
||||||||| | |||| || ||| | ||| || |||||| | || |||||||| |
Sbjct 325 AACAAAGTAATTTTAGTTGGAAATCTTGGTCAA-GACCCAGAAGTTCGCTACATGCCGAA 267
Query 41231 CGGCGGCGCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCAC 41290
||||| || |||||||| ||| | || || ||||||| ||| || || ||
Sbjct 266 TGGCGGTGCCGTTGCTAACATAACTTTAGCTACTTCTGAAAGTTGGCGTGACAAGCAAAC 207
Query 41291 CGGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGA 41350
||| || | ||||| |||| ||||||||||| |||| | || || ||||| || ||
Sbjct 206 CGGAGAAACTAAAGAGAAAACTGAATGGCACCGTATTGTTTTGTTTGGCAAGCTAGCTGA 147
Query 41351 AATTGCTAGCGAATACCTGCGCAAAGG-TAGCAAGGTGTTCATTGAAGGCAGCCTGCGAA 41409
| | ||| | || ||||| |||||||| | |||| | | ||||||||||| || | ||
Sbjct 146 AGTCGCTGGTGAGTACCTTCGCAAAGGATCTCAAGTT-TACATTGAAGGCACACTACAAA 88
Query 41410 CGCGTAAATGGCAGGACCAGGCTGGCGTTGATCGCTACACCACTGAA 41456
| ||||||||| |||||||| || ||||| |||||||| |||
Sbjct 87 CTCGTAAATGGACTGACCAGGCAGGTGTTGAAAAATACACCACCGAA 41
>seq65974
Length=1275
Score = 84.2 bits (92), Expect = 6e-12
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 7085 TGCGATTTTGTCGCAGCTTTACCCGCCGTCAGTGACAGCATCAGGTTTTTGATACCAGTG 7144
|| ||||||||||| | ||| || || | | |||||| | |||||||||||||||
Sbjct 1079 TGTGATTTTGTCGCTGATTTCCCTTTGGTTAACGCCAGCATAAAGTTTTTGATACCAGTT 1138
Query 7145 GCGGCAATCTCGTTTTGCACACCCATGCCGCGCAGTGTCGCACCAAGTGCGGCAATCTCA 7204
| ||| | || | || ||||| ||| | ||| || || |||||||||||||||
Sbjct 1139 GAGGCCACATCTGACTCGACGCCCATACCGGCAATTGTTGCGCCCAGTGCGGCAATCTCA 1198
Query 7205 CCGGAAGCAGTACCGGCAACCTCGCCAAGTGGCCCGATGCG 7245
||||| ||| ||| || || | || ||||| || || ||
Sbjct 1199 CCGGAGGCAAGACCCGCCACTGCACCCAGTGGGCCAATACG 1239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133103691041472
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |