Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq44371 107 1e-18 seq25273 98.7 6e-16 >seq44371 Length=3624 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| |||||||| || | ||| | || |||||||||||||||||||| | Sbjct 1095 CCTCCTCTGAGACGCAATACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCC 1154 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||||| ||||||| | |||||| || || || ||||| || || ||||| || || Sbjct 1155 AAGGTTCGTCCGTCTTCCAATTGTTTGCCAGCGAAAATTAAGCGTTGCTGGTCAGGTGGA 1214 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||| ||||||||| ||| || | |||||| | ||| || || || || Sbjct 1215 ATTCCTTCCTTGTCT-TGAATCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCAAC 1273 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || |||||||| || | ||||| |||||||| ||||| Sbjct 1274 CTCAAGTGTGATGGTTTTACCCGTAAGAGTTTTAACAAAAATTTGCAT 1321 >seq25273 Length=2210 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | |||||| | |||||||||||| || ||||| || |||||||| || | Sbjct 1737 CGCCTCCGCGAAGACGAAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGG 1796 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || || || |||| || || || || || ||||| |||||||| || || || || | Sbjct 1797 CTAGAGTACGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAG 1856 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | | |||||||| ||| |||||| |||| | ||| || || ||| | Sbjct 1857 GAATACCCTCCTTATCTTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAA 1916 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || || || || || || || || |||||||| ||||| Sbjct 1917 CTTCTAAAGTGATAGTCTTGCCTGTCAATGTCTTGACAAAAATTTGCAT 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314472787727816