Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq25273 145 7e-30 seq44371 141 8e-29 >seq25273 Length=2210 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| ||||| | || || | ||||| || || | Sbjct 2193 ATGCAAATCTTCGTGAAGACTTTGACTGGCAAAACCATCACCTTGGAAGTCGAGCCATGT 2134 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || ||||| ||||| ||||||||||| || || |||||| Sbjct 2133 GACACTATCGAGAACGTAAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAA 2074 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||| | ||| ||||| ||||||||||| | || | ||||| |||||| Sbjct 2073 CAACGTTTAATTTTCGCTGGCAAGCAATTGGAAGATGGCCGTGCCTTGTCCGACTACAAC 2014 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| ||| | || ||||| | || ||||| ||||| || Sbjct 2013 ATCCAAAAGGAGTCTACCCTTCACTTGGTCCTCCGCTTGCGTGGTGGTAT 1964 >seq44371 Length=3624 Score = 141 bits (156), Expect = 8e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||||| || || || | || || ||||| || ||||| || Sbjct 1321 ATGCAAATTTTTGTTAAAACTCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTTCG 1262 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| || ||| || ||||||||||| ||||| || ||||| || || Sbjct 1261 GATACTATTGAACATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCACCTGACCAG 1202 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || ||||| | ||| |||||||||||||||||| | ||| | | ||||| ||| Sbjct 1201 CAACGCTTAATTTTCGCTGGCAAACAATTGGAAGACGGACGAACCTTGGCTGATTATAAC 1142 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 ||||||||||| || || || ||| | || |||||| Sbjct 1141 ATTCAAAAGGAATCTACGTTGCATCTAGTATTGCGT 1106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434554416791040