Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq66707 82.4 3e-11 >seq66707 Length=2212 Score = 82.4 bits (90), Expect = 3e-11 Identities = 222/335 (66%), Gaps = 6/335 (2%) Strand=Plus/Minus Query 7276 AGAGGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTAC 7335 || ||| | |||||||| ||| | ||||| || | ||| ||||| ||| |||||| Sbjct 334 AGGGGTATAAACAAAGTAATTTTAGTTGGAAATCTTGGTCAAGACCCAGAAGTTCGCTAC 275 Query 7336 ATGCCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGAC 7395 ||||| || ||| ||| || | ||||| || | || || || || ||| ||| Sbjct 274 ATGCCGAATGGCGGTGCCGTTGCTAACATAACTTTAGCTACTTCTGAAAGTTGGCGTGAC 215 Query 7396 AAGCAGACCGGCCAGCAAC--AGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTC 7453 ||||| ||||| || ||| | || | || | ||||| | || || || || Sbjct 214 AAGCAAACCGG--AGAAACTAAAGAGAAAACTGAATGGCACCGTATTGTTTTGTTTGGCA 157 Query 7454 GCCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCA 7513 || || || |||| || |||||||| ||||| || || || || ||| | ||||||| Sbjct 156 AGCTAGCTGAAGTCGCTGGTGAGTACCTTCGCAAAGGATCTCAAGTTTACATTGAAGGCA 97 Query 7514 GCCTGCGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAA 7573 || | || || || ||| | |||| || || |||||||||||| ||| Sbjct 96 CACTACAAACTCGTAAATGGACTGACCAGGCAGGTGTTGAAAAATACACCACCGAAGTAG 37 Query 7574 TCGTCGACA-TGCACGGACAGATGCAGATGCTTGG 7607 | || ||| || | | || ||||||||||| || Sbjct 36 TAGTAAACATTGGAGGCAC-TATGCAGATGCTAGG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194664308020944