Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq66944 217 2e-51 >seq66944 Length=5658 Score = 217 bits (240), Expect = 2e-51 Identities = 319/450 (71%), Gaps = 6/450 (1%) Strand=Plus/Plus Query 128633 CATCAGGTTATTAATCTGAACACCATAATCTAAATGACGAATACGGTTTTCATCTACACC 128692 |||||| ||||| | ||||||||||| || | ||||||| |||||| || ||||| || Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 128693 TTTGTTGTTCTTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAG 128752 ||| ||||| | || || | |||| |||||||||||||| ||||||||| | || Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 128753 TGTCGCCGCGCCACCACGGACTCCGCCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTG 128812 ||| || || ||||| || || || ||||| || || ||||||||||| || || ||||| Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 128813 CTTCCAGAAAGGAATAACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCTTC 128872 || | || || ||| || ||||| |||| ||| || | | |||| | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCG---TCACGTATCGAACTTCC 1747 Query 128873 ---TGCACGAATCATACCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTTGT 128929 |||||||| ||| |||||||| |||||||| || || | | ||||| Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 128930 AATTGACGCAGCAGCTTCGTTAATTGAATTAAGACTATCACCGCCTTCAATAACCACGCA 128989 ||||| | || | | ||||| |||| || ||||||||| ||||| | ||||| Sbjct 1808 AATTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCA 1867 Query 128990 TGAACTAAACTGACGTGTCGGAGTACGAACACCAGACATAATTGGAGTTGGCAATGAAAT 129049 ||||| ||||| || | || || || ||||| ||||| ||||| || ||||| ||||| Sbjct 1868 GGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAAT 1927 Query 129050 CTTTTTAGTAGAAACTGCATCATAGAAACG 129079 || ||| |||| ||||| ||||| || Sbjct 1928 TTTAAAAGTTGAAATAGCATCGTAGAAGCG 1957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531628307604160