Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq66944 165 8e-36 seq66648 114 1e-20 seq66893 104 2e-17 >seq66944 Length=5658 Score = 165 bits (182), Expect = 8e-36 Identities = 320/467 (69%), Gaps = 9/467 (2%) Strand=Plus/Plus Query 137454 GGACTAAACAATGTAATATAATCATCATTA-ATTAGTCGTTCAATCATAAGGTCATTAAT 137512 |||||||| | ||||||| || || | | ||| || | | ||| || | ||| | Sbjct 1467 GGACTAAATAGAGTAATATC-TCTTCCCTGGAGTAGGCGCTGATACATCAGTTTATTCAA 1525 Query 137513 TTGAACACCATAATCTAAATGACGAATACGGTTTTCTTCAATACCTTTATTATTTTTAAG 137572 |||||||||||| || | ||||||| |||||| ||||| | || ||||| || | Sbjct 1526 TTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGGTTATTCTTCAA 1585 Query 137573 AACTAACAATTTTTCTAATTCAAGGTGCCACATTGGGTAATATAAAGTAGCAGAACCACC 137632 || | || |||| | ||| | |||||| ||||| || ||| || |||| |||||| Sbjct 1586 GACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTTGCAGCACCACC 1645 Query 137633 TCGAATCCCACCTTGGGAACATGATTTTACAGATGCCAAATGGGTTTTCCAAAATGGAAT 137692 || | |||||||| ||||| ||||| || | | | | | ||| ||||||| || Sbjct 1646 GCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTGTTTATAAAATGGGAT 1705 Query 137693 GACACCGGTATGGACAACTTCGCCAAATCCTATTTTAGACCCTTCAGCCCTATACATACC 137752 ||| ||||| | | ||||||| | ||| | || || | | ||| Sbjct 1706 ACAACCCGTATGAAAAGCTTCGCCGTCACGTATCGAACTTCCCAAGGCACGAATTCGACC 1765 Query 137753 GGCATTAATACCAATACCAGCTCTTTTAGAAATGTATTTTACAATAGCTGCATTT---GT 137809 ||||||||| ||||||||||| | || |||| ||||| ||||| |||| || || Sbjct 1766 GGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAAT---TGCACTTGAAGT 1822 Query 137810 TTCATTAATAGAATCTAAAGAATCACCGCTATCAATAACTACGCAAGAACTAAATTGACG 137869 | ||||||| ||||| | ||||||| ||||| | |||||| ||||| || || || Sbjct 1823 TGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGAACTGAACTGGCG 1882 Query 137870 TGTTGGGGTTCTTACACCAGACAAAATTGGTGTTGGTAAAGACAATT 137916 | || || | |||||| |||| |||||||| || ||||| |||| Sbjct 1883 AATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGA-AATT 1928 >seq66648 Length=2014 Score = 114 bits (126), Expect = 1e-20 Identities = 214/313 (68%), Gaps = 26/313 (8%) Strand=Plus/Plus Query 129147 AGTAGAATTTTTGAATCCAACAGCCATAGGTAATCCTGAAGCAATTTCACGATGGGTCTG 129206 |||| |||||| || ||||||| ||| | || || || || ||||||||||| || || Sbjct 141 AGTACCATTTTTAAAACCAACAGGCATTGACAAACCAGAGGCCATTTCACGATGAGTTTG 200 Query 129207 TGATTCTGTAGTACGAGCACCAATAGCGACCCAACTAAAAATACCTGATAGATACTTAAT 129266 |||||||||||| || || |||||||| ||| || || | | | ||||||| | Sbjct 201 TGATTCTGTAGTGCGTGCTCCAATAGCTGACCAGCTGAAGAGATCGCCAAGATACTGAGG 260 Query 129267 AGTAAATGGGTCCAAGACCTCTGTCGCCAAAGGAAGTC---------CAAGATTCAATAG 129317 | || || |||| | || || || | ||||||| |||||||||||| Sbjct 261 ACTATTAGGATCCAGTGCTTCAGTAGCTAGTGGAAGTCCCATCTCAACAAGATTCAATAA 320 Query 129318 TTCTAAACAGAGATGGCGGGCAATTCTTAACCCTTCATCAATATTAAAAG----AACCAT 129373 | ||| || || ||||| || ||| | || |||| ||||| | |||| Sbjct 321 T----AAC-----TGTCGTGCAATATGTAGACCTGCTTCCATATCAAAAGTGTTATCCAT 371 Query 129374 TTAATTCTGGGTCGTTGACTAGGCCTTTCCAACCTACAGTTGTGCGTGGTTTTTCAAAAT 129433 |||| || || || | | ||||||||| || ||||| || || ||||||||||| | Sbjct 372 ---ATTC-GGATCATTAATCAAGCCTTTCCAGCCAACAGTAGTACGGGGTTTTTCAAAGT 427 Query 129434 AAACCCGCATAAC 129446 |||| ||||| || Sbjct 428 AAACTCGCATTAC 440 >seq66893 Length=3550 Score = 104 bits (114), Expect = 2e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 64857 AAATGGTACACACTACAGGATTCGAACCTGTGACCTAGGGCTTAGAAGGTCCTTGCTCTA 64916 ||||||| | | ||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 1720 AAATGGTGCGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCTGGTGCTCTA 1661 Query 64917 TCCAACTGAGCTAAGTGTGCAT 64938 ||||||||||||||| | |||| Sbjct 1660 TCCAACTGAGCTAAGGGCGCAT 1639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517803087622080