Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq66944 199 4e-46 >seq66944 Length=5658 Score = 199 bits (220), Expect = 4e-46 Identities = 297/420 (71%), Gaps = 6/420 (1%) Strand=Plus/Minus Query 22794 ATTTCATTGCCAACTCCTATTATGGCTGGTTGTCGTACTCCGACTCGACAGTTTAGTTCA 22853 ||||| ||||| || || || ||| | ||| || || || | ||| ||||| ||||| Sbjct 1927 ATTTCTTTGCCCACACCAATCATGTCCGGTGTACGCACACCTATTCGCCAGTTCAGTTCC 1868 Query 22854 TGCGTTGTTATTGAGGCAGGTGATTCATTAAAGTCTATCAATAAGGCTTCCGCTTCAATT 22913 ||||| | |||||| | |||||| | | || || ||| |||| | ||||| Sbjct 1867 TGCGTACTAATTGAGTCCGGTGATAGCCTCGATTCGATTAATGCAACTTCAAGTGCAATT 1808 Query 22914 GTTGAATATATCTCTAAACGCGCTGGAATTGGTATTAACGTTGGTATGATTCGTGCC--- 22970 || ||||| | || |||| ||||| ||||| ||||| | ||| ||||||||| Sbjct 1807 GTGAAATATGTTTCCCAACGGGCTGGTATTGGCATTAATGCCGGTCGAATTCGTGCCTTG 1748 Query 22971 GAAGGTTCTAAGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAA 23030 | | |||| | || | || |||| ||||| ||| ||| || |||| ||| Sbjct 1747 GGAAGTTCGATACGTGAC---GGCGAAGCTTTTCATACGGGTTGTATCCCATTTTATAAA 1691 Query 23031 CATTTTCAGACTGCTGTTAAATCATGTTCACAGGGCGGAATTCGTGGTGGCGCTGCTACT 23090 || |||||||| || |||||||| ||||| || || || | || ||||| ||||| || Sbjct 1690 CACTTTCAGACCGCAGTTAAATCTTGTTCTCAAGGTGGTGTACGCGGTGGTGCTGCAACA 1631 Query 23091 GCTTATTATCCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAA 23150 | ||||| || ||||| |||||||| |||| | | || || ||||| |||||| Sbjct 1630 CTATTCTATCCAATATGGCACTTGGAAGTGGAAAGTTTACTGGTCTTGAAGAATAACCGT 1571 Query 23151 GGTGTAGAAGAAAACCGCATTCGTCATATGGATTATGGTGTTCAACTGAATGATCTAATG 23210 || |||||||| ||||| ||||||| ||||| |||||||||||| ||||| | || ||| Sbjct 1570 GGCGTAGAAGATAACCGTGTTCGTCACATGGACTATGGTGTTCAATTGAATAAACTGATG 1511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534221335681280