Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_028829.1 Length=248088 Score E Sequences producing significant alignments: (Bits) Value seq66944 165 1e-35 >seq66944 Length=5658 Score = 165 bits (182), Expect = 1e-35 Identities = 300/434 (69%), Gaps = 5/434 (1%) Strand=Plus/Plus Query 236254 ATTGATACACTGTAGTCAAGATGACGAATACGGTTTTCTTCAACACCTTTGTTGTTCTTC 236313 ||||| |||| ||||| | ||||||| |||||| ||||| || || ||| |||||| Sbjct 1525 ATTGA-ACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGGTTATTCTTC 1583 Query 236314 AGAACTAACAGTTTTTCAACTTCTAAGTGCCAAATCGGGTAAGTTAGAGTCGCAGCACCA 236373 | || | | |||| ||||| |||||||| || || || ||| || ||||||||| Sbjct 1584 AAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTTGCAGCACCA 1643 Query 236374 CCACGTACACCACCTTGAGAACACGATTTAACCGCAGTTTGAAAGTGTTTCCAGAATGGA 236433 || |||||||||||||||||||| |||||||| || || ||||||||||| | ||||| Sbjct 1644 CCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTGTTTATAAAATGGG 1703 Query 236434 ATTACACCAGTGTGACGAATCTCACCTGAACG-AACG-ACTGCCCCTTCAGCACGAATCG 236491 || ||| || ||| | || || ||| | || ||| ||| |||||||| Sbjct 1704 ATACAACCCGTATGAAAAGCTTCGCCGTCACGTATCGAACTTCCC--AAGGCACGAATTC 1761 Query 236492 CACCGCCATTCACACCGATACCTGCACGCTTACTAATGTAACTTACAATTGATTTAGCCA 236551 |||| |||| | || ||||| || || | || || | ||||||| | | Sbjct 1762 GACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAATTGCACTTGAAG 1821 Query 236552 CTTCATTGATTGAATGCAAAGAGTCGCCTGATTCAATCTTAACACACGAACTAAACTGGC 236611 | |||| || |||| | || || || ||||| || || ||||| ||||||| Sbjct 1822 TTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGAACTGAACTGGC 1881 Query 236612 GTGTCGGGGTACGAACGCCTGCCATAATCGGTGTCGGTAATGAAAGTTTGTGAGTCGAAA 236671 | | || || || || || | ||| || ||||| || || |||| ||| ||| |||| Sbjct 1882 GAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAATTTTAAAAGTTGAAA 1941 Query 236672 CTGCATTGTAGAAG 236685 |||| ||||||| Sbjct 1942 TAGCATCGTAGAAG 1955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793089307612160