Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_028881.1 Length=170473 Score E Sequences producing significant alignments: (Bits) Value seq66944 159 4e-34 >seq66944 Length=5658 Score = 159 bits (176), Expect = 4e-34 Identities = 282/410 (69%), Gaps = 6/410 (1%) Strand=Plus/Plus Query 142859 TTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCAACGCCTTTGTTGTTT 142918 ||||| || | || |||||||| ||||||| |||||| || || ||||| ||| || Sbjct 1521 TTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGGTTATTC 1580 Query 142919 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 142978 |||| || || | | |||| |||||||| ||||| || ||||| | || ||||| Sbjct 1581 TTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTTGCAGCA 1640 Query 142979 CCGCCACGGATTCCACCTTGTGAACATGATTTAACTGCAGTCTGGAAATGCTTCCAGAAT 143038 || || || | |||||||| ||||| ||||||||||| ||||| || || || | ||| Sbjct 1641 CCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTGTTTATAAAAT 1700 Query 143039 GGAATAACACCGGTATGTTTGACTTCACCCATACCAATACGAGAACCTTC---AGCACGA 143095 || ||| ||| ||||| |||| || || || |||| | | |||||| Sbjct 1701 GGGATACAACCCGTATGAAAAGCTTCGCCGTCACGTAT---CGAACTTCCCAAGGCACGA 1757 Query 143096 ATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATATACTCGATTATTGAGTTA 143155 || ||| | || || |||||||| || |||| |||| ||| | | |||| | Sbjct 1758 ATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAATTGCACTT 1817 Query 143156 GCAGTTTTATTAATTGATTTCAGCGAGTCACCTGCTTCAATAACAACGCAAGAACTAAAC 143215 | |||| |||||| || | || ||||| | ||||| | ||||| ||||| ||| Sbjct 1818 GAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGAACTGAAC 1877 Query 143216 TGACGGGTCGGGGTACGAGCACCAGCCATAATAGGAGTAGGCAATGAAAT 143265 || || | || || || |||| | ||| || || || ||||| ||||| Sbjct 1878 TGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAAT 1927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544929166791360