Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_028894.1 Length=170336 Score E Sequences producing significant alignments: (Bits) Value seq66944 170 2e-37 >seq66944 Length=5658 Score = 170 bits (188), Expect = 2e-37 Identities = 290/419 (69%), Gaps = 6/419 (1%) Strand=Plus/Plus Query 140759 CATCAGGTTATTCAACTGGACACCATAGTCCATATGCCTGATACGGTTTTCTTCAACGCC 140818 |||||| |||||||| || |||||||||||||| || | | |||||| ||||| ||||| Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 140819 TTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 140878 ||| ||||||| || |||||| |||| |||||||| ||||| || ||||| | Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 140879 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATG 140938 || ||||| || || || | |||||||| ||||| |||||||| || || || || || Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 140939 TTTCCAGAACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCGAACCTTC 140998 ||| | || || ||| ||| ||||| |||| || || | |||||| | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCGTCAC---GTATCGAACTTCC 1747 Query 140999 ---AGCACGAATCATGCCAACGTTGATACCGATACCTGCACGCTTACTGATATATTCGAT 141055 |||||||| || | || || || ||||| || || | | ||||| | Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 141056 GATTGAATTAGCAGTCTTATTGATTGACTTCAGGGAGTCAGCCGCTTCGATAACCACGCA 141115 |||| | | | ||| ||| || || | ||| ||| | | || || | ||||| Sbjct 1808 AATTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCA 1867 Query 141116 GGAACTGAACTGTCTTGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAA 141174 |||||||||||| | ||||||| | | || | |||||| ||||||||||| |||| Sbjct 1868 GGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAA 1926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544491133688320