Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_028925.1 Length=170822 Score E Sequences producing significant alignments: (Bits) Value seq66944 167 3e-36 >seq66944 Length=5658 Score = 167 bits (184), Expect = 3e-36 Identities = 289/419 (69%), Gaps = 6/419 (1%) Strand=Plus/Plus Query 143087 CATCAGGTTATTAAGCTGGACACCATAGTCCATATGTCTGATACGGTTTTCTTCAACGCC 143146 |||||| ||||| | || |||||||||||||| || | | |||||| ||||| ||||| Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 143147 CTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGC 143206 ||| ||||||| || |||||| |||| |||||||| ||||||| ||||| | Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 143207 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATG 143266 || ||||| || || || | |||||||| ||||| |||||||| || || || || || Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 143267 TTTCCAGAACGGAATAACACCAGTATGGCGAACTTCACCCATACCGATTTTCGAACCTTC 143326 ||| | || || ||| ||| ||||| | |||| || || | |||||| | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCGTCAC---GTATCGAACTTCC 1747 Query 143327 ---AGCACGAATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGATATATTCGAT 143383 |||||||| ||| | || ||||| ||||| || || | | ||||| | Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 143384 GATTGAATTGGCCGTCTTATTAATTGACTTCAGGGAGTCAGCAGCTTCGATAACCACACA 143443 |||| | | | || |||||| || | ||| ||| | | || || | || || Sbjct 1808 AATTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCA 1867 Query 143444 GGAACTGAACTGCCTGGTAGGTGTTCTGGCGCCCGCCATGATGGGCGTGGGCAACGAAA 143502 |||||||||||| | ||||||| | | || | |||||| || |||||||| |||| Sbjct 1868 GGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAA 1926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546045032141440