Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq44371 114 9e-21 seq25273 84.2 2e-11 >seq44371 Length=3624 Score = 114 bits (126), Expect = 9e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27788 AAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCA 27847 |||||||||||||||| ||||||||||| || ||| || ||| |||| || ||| Sbjct 1323 AAATGCAAATTTTTGTTAAAACTCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTT 1264 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | || | | || || ||| || || ||||| ||||| |||| || | Sbjct 1263 CGGATACTATTGAACATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCACCTGACC 1204 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||||| |||||||| || || ||||||||||| |||| ||| | |||| | ||||| | Sbjct 1203 AGCAACGCTTAATTTTCGCTGGCAAACAATTGGAAGACGGACGAACCTTGGCTGATTATA 1144 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGT 28005 |||| ||||| || || |||||| | || |||||| Sbjct 1143 ACATTCAAAAGGAATCTACGTTGCATCTAGTATTGCGT 1106 >seq25273 Length=2210 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || |||||||| |||| || || ||||| |||||||| || || || |||||||| Sbjct 2100 GATAAAGAAGGCATTCCCCCAGATCAACAACGTTTAATTTTCGCTGGCAAGCAATTGGAA 2041 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | || ||||||||| |||||||||||||| ||| || | || ||||| | Sbjct 2040 GATGGCCGTGCCTTGTCCGACTACAACATCCAAAAGGAGTCTACCCTTCACTTGGTCCTC 1981 Query 28003 CGTTTGCGTGGCGG 28016 || |||||||| || Sbjct 1980 CGCTTGCGTGGTGG 1967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355572024288504