Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq44371 152 1e-31 seq25273 120 7e-22 >seq44371 Length=3624 Score = 152 bits (168), Expect = 1e-31 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || ||||| ||||||||||| || | ||| | ||| ||||||| || ||||| Sbjct 1125 GTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTTCGTCCGTCTTCCAATTGTTTGCCA 1184 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || | |||||| |||||||| |||| |||||||||||| || ||||| ||| Sbjct 1185 GCGAAAATTAAGCGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGAATCTTAGCTTTA 1244 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || | ||| || || || || ||||||||| || ||||| || || ||||| ||||| Sbjct 1245 ACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGTGTGATGGTTTTACCCGTAAGAGTT 1304 Query 211098 TTTACAAACACCTGCATTT 211116 || ||||| | ||||||| Sbjct 1305 TTAACAAAAATTTGCATTT 1323 >seq25273 Length=2210 Score = 120 bits (132), Expect = 7e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || | || || || || || || || |||||||| || || || || Sbjct 1745 CGAAGACGAAGCACCAAATGGAGTGTCGATTCCTTCTGTATGTTATAGTCGGCTAGAGTA 1804 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||| || |||||||||||||| || ||||| | ||||| || || ||||||| || Sbjct 1805 CGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCC 1864 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| || |||||||| || || ||||| || || || || ||||| || | | Sbjct 1865 TCCTTATCTTGGATCTTGGCCTTTACATTTTCAATAGTATCGGATGGCTCAACTTCTAAA 1924 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | ||||| ||||| | ||||| Sbjct 1925 GTGATAGTCTTGCCTGTCAATGTCTTGACAAAAATTTGCAT 1965 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||| || ||||| ||||||||||| || || | | || | |||||| Sbjct 1982 AGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGCACGGCCATCT 2041 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||||| ||||| || | |||||||| || || |||| ||||| || || Sbjct 2042 TCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGAATGCCTTCTTTATCT 2101 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || ||||| ||||| |||||| | || || || | ||||| || Sbjct 2102 TGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCGACTTCCAAGGTGATGGTT 2161 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | |||||| || || | ||||| Sbjct 2162 TTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158157653333480