Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_030919.1 Length=42418 Score E Sequences producing significant alignments: (Bits) Value seq3939 354 2e-93 >seq3939 Length=2233 Score = 354 bits (392), Expect = 2e-93 Identities = 325/412 (79%), Gaps = 8/412 (2%) Strand=Plus/Plus Query 22442 AACGAACAGCAAACCACGCTGTTGATCACATACATGCGAAACAATGAAGTTGTGCGTGAA 22501 ||||| ||||||||||||||| ||||||| |||||||| ||||| || |||| || | Sbjct 1016 AACGAGCAGCAAACCACGCTGCTGATCACTTACATGCGGAACAACGACATTGTTCGGGCG 1075 Query 22502 TTCAAAAAGCGCCTGGTAGCTGAATTCTTCACTATGCGTAGCGCGCTGGCGAAAAAGAAA 22561 || |||||||| |||| || ||||| ||| |||||| | ||||| ||| ||||| Sbjct 1076 TTTAAAAAGCGGTTGGTTGCGGAATTTTTCCGTATGCGCAAGGCGCTAGCGGGCAAGAAG 1135 Query 22562 ATGGATCGCAACTCTGCACGCCTGGAGTACAAACCCATGACCGACGCCATCAAACATGAG 22621 ||||| |||||| |||| || || |||||| || ||||| ||||||||||| |||||| Sbjct 1136 ATGGACCGCAACACTGCCCGTCTTGAGTACCGCCCAATGACAGACGCCATCAAGCATGAG 1195 Query 22622 CGAGAGGCTCAGGGTAAGCAGATCGCCCCGCATCACTTCAGCAACGAAGCTGACCTGATT 22681 ||||| || ||||| ||| || || |||||||||||||||||||| || ||||||||| Sbjct 1196 CGAGAAGCGCAGGGCAAGGCCATTGCTCCGCATCACTTCAGCAACGAGGCCGACCTGATT 1255 Query 22682 AACCGACTGGCGCTGGGAATGACGGCGGCCAAGTTCCGCGTGCATCACGAAATCGGGAAG 22741 ||| | | || || || | || |||||||| | |||||||||| |||| Sbjct 1256 AACTGTATCGCACT--------TGGTNGAAAAATTCCGCGTTTACCACGAAATCGAGAAG 1307 Query 22742 AAAGAGCCGATCCGCGATTACCTGACGCCGGAACAAATTCACTGCATCACCGAGCTACAG 22801 |||||| | |||||||| || ||||| ||||| ||||| | |||||||| ||||| || Sbjct 1308 AAAGAGTCAATCCGCGACTATCTGACACCGGAGCAAATCCGTTGCATCACGGAGCTTCAA 1367 Query 22802 CGCGCCAACACGGTATTCATCAGCATGGGGTGGGACTTCGAACAACGCAAAG 22853 || |||||||||||||||||| ||||||| |||||||| ||||||||||||| Sbjct 1368 CGTGCCAACACGGTATTCATCGGCATGGGCTGGGACTTTGAACAACGCAAAG 1419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135508177821120