Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq66944 131 2e-25 seq66893 113 5e-20 >seq66944 Length=5658 Score = 131 bits (144), Expect = 2e-25 Identities = 275/403 (68%), Gaps = 14/403 (3%) Strand=Plus/Plus Query 139646 TGGACACCATAATCTAAATGACGAATACGGTTTTCATCGATACCTTTATTATTCTTCAGT 139705 || |||||||| || | ||||||| |||||| || || | || |||||||||| Sbjct 1527 TGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCCACGGTTATTCTTCAAG 1586 Query 139706 ACGATTAATTTTTCATATTCCAGATGCCACATCGGATAATATAATGTCGCCGCACCACCA 139765 || | ||| |||| ||||| ||||| || ||||| ||| ||| || |||||||| Sbjct 1587 ACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAGTGTTGCAGCACCACCG 1646 Query 139766 CGTACACCACCTTGTGAACATGATTTCACTGATGCCTGATGAGT-TTTCCAGAATGGAAT 139824 |||||||||||||| ||||| ||||| |||| | |||| ||| ||| | ||||| || Sbjct 1647 CGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGA-AAGTGTTTATAAAATGGGAT 1705 Query 139825 AACACCAGTGTGACGAACTTCGCCCGCGCCAATTTTAGAACCTTC---TGCACGATACAT 139881 | ||| || ||| | |||||| || || | | |||| | | |||||| Sbjct 1706 ACAACCCGTATGAAAAGCTTCGC---CGTCACGTATCGAACTTCCCAAGGCACGAATTCG 1762 Query 139882 ACCAGCATTAACACCAATACCAGCACGTTTACTGATGTACTTAATAATACATTCGTTTG- 139940 ||| ||||||| ||||||||||| |||| | || || | ||| | | ||| Sbjct 1763 ACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCACAAT---TGCACTTGA 1819 Query 139941 TCTTG--TTAATTGAATCCAGCGAATCACCGCCTTCAATAACAACACAAGAGCTAAACTG 139998 ||| ||||| ||||| || ||||||| ||||| | || || || || ||||| Sbjct 1820 AGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCAGGAACTGAACTG 1879 Query 139999 ACGTGTCGGAGTTCTTACGCCCGCCATAATCGGAGTAGGTAAA 140041 || | || || | ||| || | ||| || || || || ||| Sbjct 1880 GCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAA 1922 >seq66893 Length=3550 Score = 113 bits (124), Expect = 5e-20 Identities = 74/82 (90%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459 |||||| | |||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1720 AAATGGTGCGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCTGGTGCTCTA 1661 Query 66460 TCCAGCTGAGCTAAGAGTGCAT 66481 |||| |||||||||| | |||| Sbjct 1660 TCCAACTGAGCTAAGGGCGCAT 1639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521678241789120