Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq66944 208 8e-49 >seq66944 Length=5658 Score = 208 bits (230), Expect = 8e-49 Identities = 301/421 (71%), Gaps = 8/421 (2%) Strand=Plus/Plus Query 139466 CATCAAATCATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCC 139525 ||||| | ||||| |||||||||||| ||||| ||||||| ||||| ||||||||||| Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 139526 TTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 139585 |||||| ||||| || || | | |||| |||||||| ||||| || ||||| | Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 139586 AGTAGCAGCGCCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATG 139645 || ||||| || || || | ||||| || ||||| ||||||||||| |||||||| || Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 139646 TTTCCAAAAAGGAATAACACCAGTATGACGTACTTCACCCATGCCAATTTTAGAACCTTC 139705 ||| |||| || ||| ||| |||||| |||| || | || | | |||| | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCC---GTCACGTATCGAACTTCC 1747 Query 139706 ---AGCACGAATCATACCAACATTAATACCAATTCCAGCGCGTTTAGAGATATATTCAAC 139762 |||||||| ||| ||||||| ||||| ||||| |||| || | ||||| || Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 139763 AATTGAAGCGGAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACGACGCA 139822 ||||| | |||| ||| || || | | ||| || | |||||| | ||||| Sbjct 1808 AATTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCA 1867 Query 139823 TGAACTAAACTGCCGAGTTGGAGTACG-ACAGCCAGCCATAATAGGAGTTGGTAATGAAA 139881 ||||| ||||| ||| | || || || ||| || | ||| || || || || || |||| Sbjct 1868 GGAACTGAACTGGCGAATAGGTGTGCGTACA-CCGGACATGATTGGTGTGGGCAAAGAAA 1926 Query 139882 T 139882 | Sbjct 1927 T 1927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545936323196160