Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq44017 179 5e-40 >seq44017 Length=1387 Score = 179 bits (198), Expect = 5e-40 Identities = 305/440 (69%), Gaps = 3/440 (1%) Strand=Plus/Minus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||| | |||||| || || | | | || ||||| ||||||| ||| ||||| ||| Sbjct 440 TTATCAACTGTAAATTGTATAGCATTTGCAGCCGGTTTGGTACGTAAATAATACATGCCA 381 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 ||||| |||||| |||| || || ||||| || ||| || ||| ||| | || Sbjct 380 GTTTTGAGACCCGCCTTCCAACCATAAAAATGTATAGATGTTAGCTTGCCATAGTTTGGT 321 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 || |||| ||| ||||| | ||| ||||||||||| || || || || | |||||| ||| Sbjct 320 TCAGCTACATGTATATTAAACGATTGACTTTGATCAATAAACGCGCCACGATCAGCGGCC 261 Query 76953 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 77012 || || || | ||||| | |||||||| | ||| ||| ||| || || | Sbjct 260 ATCTTCATTGTAGTCTTCACCGATATTTCCCACACAGTCTTGTAAAGTTCACGTATTTTT 201 Query 77013 TCTGG--AAGGTT-TGTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATA 77069 | ||| || || || ||| || ||||||| | | ||||||| || | || || Sbjct 200 TGTGGTATAGATTCAATACCTTGTATTGAACCACGACTGGTTATAATTTTAGTTTTCATT 141 Query 77070 TCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGA 77129 || |||| |||||| | || || | | | | | | |||| ||||||| | |||| Sbjct 140 TCTTCATCCCACAAACCCAATTCGGTAAGATCGCGCAACAAATGATGATTAACAACTTGA 81 Query 77130 AATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 77189 ||||| || || | ||| | |||| | ||||| ||| ||||| ||||| | ||||||| Sbjct 80 AATTCGCCCGAAAGTACGCGACGATTATAAATGTTAGAAGTATAAGGTTCAAAAGATTCA 21 Query 77190 TTGTTTCCCAAAATTTGAGC 77209 || || |||| |||||| || Sbjct 20 TTATTGCCCATAATTTGTGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694087431681280