Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq66944 233 2e-56 >seq66944 Length=5658 Score = 233 bits (258), Expect = 2e-56 Identities = 325/453 (72%), Gaps = 12/453 (3%) Strand=Plus/Minus Query 136355 CGTTTCTATGATGCAGTTTCTACTAAAAAGATTTCATTGCCAACACCAATTATGTCTGGT 136414 || ||||| ||||| |||| ||| || ||||| ||||| |||||||| ||||| ||| Sbjct 1957 CGCTTCTACGATGCTATTTCAACTTTTAAAATTTCTTTGCCCACACCAATCATGTCCGGT 1898 Query 136415 GTTCGTACTCCAACCCGCCAGTTCAGTTCATGCGTAGTTATTGAAGGTGGTGATAGTCTT 136474 || || || || | |||||||||||||| |||||| | ||||| |||||||| || Sbjct 1897 GTACGCACACCTATTCGCCAGTTCAGTTCCTGCGTACTAATTGAGTCCGGTGATAGCCTC 1838 Query 136475 AATTCAATTAACGAAGCCGCTGCATCAATTACGAAATACATTAGTAAGCGTGCTGGTATT 136534 |||| ||||| | | | | ||||| |||||| || | || ||||||||| Sbjct 1837 GATTCGATTAATGCAACTTCAAGTGCAATTGTGAAATATGTTTCCCAACGGGCTGGTATT 1778 Query 136535 GGTATTAATGCGGGGATGATTCGTGCAGAAGGATCAAAAATTGGATTCGGTGAAGTC-AA 136593 || |||||||| || |||||||| ||| | || ||| || ||| | | || Sbjct 1777 GGCATTAATGCCGGTCGAATTCGTGCCTTGGGA-----AGTTCGATACG-TGACGGCGAA 1724 Query 136594 GC-----ATACTGGTGTTATTCCTTTCTGGAAACACTTCCAAACCGCAGTTAAGTCATGC 136648 || |||| ||| ||| || || | |||||||| || ||||||||||| || || Sbjct 1723 GCTTTTCATACGGGTTGTATCCCATTTTATAAACACTTTCAGACCGCAGTTAAATCTTGT 1664 Query 136649 TCCCAAGGCGGAGTCCGTGGTGGTGCAGCTACACTGTATTATCCGATGTGGCACTTGGAA 136708 || ||||| || || || |||||||| || ||||| | ||||| || |||||||||||| Sbjct 1663 TCTCAAGGTGGTGTACGCGGTGGTGCTGCAACACTATTCTATCCAATATGGCACTTGGAA 1604 Query 136709 GTTGAAAACCTCCTCGTACTTAAGAACAACAAAGGTGTAGATGAAAACCGTATTCGCCAT 136768 || |||| | || || | ||||| ||| || ||||| || |||||| |||| || Sbjct 1603 GTGGAAAGTTTACTGGTCTTGAAGAATAACCGTGGCGTAGAAGATAACCGTGTTCGTCAC 1544 Query 136769 TTAGATTATGGTGTTCAGATTAATAACCTGATG 136801 | || ||||||||||| | ||||| |||||| Sbjct 1543 ATGGACTATGGTGTTCAATTGAATAAACTGATG 1511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539445759698560