Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_031103.1 Length=165772 Score E Sequences producing significant alignments: (Bits) Value seq66944 214 2e-50 seq66660 86.0 7e-12 >seq66944 Length=5658 Score = 214 bits (236), Expect = 2e-50 Identities = 300/420 (71%), Gaps = 6/420 (1%) Strand=Plus/Plus Query 138400 CATTAGGTCATTCAGTTGAACGCCATAATCCATATGACGAATACGGTTTTCTTCTACGCC 138459 ||| || | ||||| |||||| ||||| ||||| ||||||| |||||| ||||||||||| Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 138460 TTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 138519 |||||| ||||| || || | | |||| |||||||| ||||| || ||||| | Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 138520 AGTAGCAGCGCCGCCACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATG 138579 || ||||| || || || | ||||| || || || |||||||| || |||||||| || Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 138580 TTTCCAAAAAGGAATAACACCAGTATGACGTACTTCACCTGTACCAATCTTAGAACCTTC 138639 ||| |||| || ||| ||| |||||| |||| || || ||| |||| | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCCGTCACGTATC---GAACTTCC 1747 Query 138640 ---GGCACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTGGAGATATATTCAAC 138696 ||||||||| ||| | ||||| ||||| ||||| |||| ||| | ||||| || Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 138697 AATTGAAGCAGAAGCTTTGTTAATAGACTTCAGCGAATCACCTGCTTCAATAACAACGCA 138756 ||||| | |||| | ||||| || | || |||||| | ||||| | ||||| Sbjct 1808 AATTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCA 1867 Query 138757 TGAACTAAACTGCCGAGTTGGAGTACGACAACCAGCCATAATAGGAGTTGGTAATGAAAT 138816 ||||| ||||| ||| | || || || ||| | ||| || || || || || ||||| Sbjct 1868 GGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAAT 1927 >seq66660 Length=2041 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/113 (79%), Gaps = 3/113 (3%) Strand=Plus/Minus Query 70366 GCTCTACCAAACTGAGCTACA-CGGAGTAAATTAAATTGGAGCGGATAATGAGAATCGAA 70424 |||||||| | || ||||| | | | || |||| ||||||||| | | |||||||| Sbjct 1055 GCTCTACCGA-CTAAGCTATATCAGCGTGGTTTAATTTGGAGCGGGCAGCGGGAATCGAA 997 Query 70425 CTCACATCATCAGATTGGAAGTCTGAGGTAAT-ACCATTATACGATATCCGCA 70476 | | | ||||||| ||||||| |||||||||| ||||||||||||| ||||| Sbjct 996 CCCGCGTCATCAGCTTGGAAGGCTGAGGTAATAACCATTATACGATGCCCGCA 944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529898556445440