Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_031117.1 Length=44885 Score E Sequences producing significant alignments: (Bits) Value seq66910 208 2e-49 >seq66910 Length=3982 Score = 208 bits (230), Expect = 2e-49 Identities = 436/650 (67%), Gaps = 0/650 (0%) Strand=Plus/Plus Query 39367 GTTGAGGTGGCACGGCGCGCTAAGACCGTGATCTTGTGCGCTCGTGAGTTTCAAGGCTCA 39426 || ||| | ||||| || | ||||| |||||||||||| | || |||||||||||||| Sbjct 264 GTGGAGATAGCACGCCGTGTGAAGACGGTGATCTTGTGCACGCGCGAGTTTCAAGGCTCT 323 Query 39427 ATTGAAGATTCTGTACATAAGTTATTAGCTGAGACAATAGAGCGTCTTGGCTATTTAAAA 39486 || ||||| || | ||| || | | ||||| || | | | || ||| || || Sbjct 324 ATCACGGATTCCGTTTACAAGCTACTCGTCGAGACGATTGCGAGACTAGGCCATCAGAAT 383 Query 39487 GAGTTTGAAATTCAGAATAAAACTATTACGCACTTGGGGACAGGTGCGACTTTTGTATTC 39546 || |||| | || || || || || ||||| | | |||||| | | || | || Sbjct 384 GAATTTGTGGTGCAAAAGAACACCATCACGCATTCAGCGACAGGGACATCCTTCATTTTT 443 Query 39547 TATGGAATTAAGAACAACCCAACAAAGATCAAGTCAATTCAAGGTGTTGGTGTTGCGTGG 39606 | || ||||| || ||| ||| || || || || |||||||| || ||| || ||| Sbjct 444 TCGGGCATTAAAAATAACGTAACCAAAATTAAATCGATTCAAGGCGTGGGTATTTGCTGG 503 Query 39607 ATTGAAGAGGCTGAGGCGGTAACAAAAAGATCATGGGATATTCTAATTCCGTCTATTCGT 39666 | ||||| || || ||||| || || || ||||| | || || |||||||| ||| Sbjct 504 GTAGAAGAAGCCGAAGCGGTCACTAAGGATTCTTGGGAGGTACTGATACCGTCTATCCGT 563 Query 39667 GGCGATAAGAACGCAAAGATTTTTATTACTTTTAACCCTGCCAATATTCTTGATGATACC 39726 || ||||| | || | |||| ||| ||| ||||| |||||||||||||||||| Sbjct 564 GGGGATAAACATGCGGAAATTTGGGTTAGTTTCAACCCGAAAAATATTCTTGATGATACC 623 Query 39727 TATCAAAGATTTATTGTTAATCCTCCTAAAAACTCATTAGTTTTGAAGGCTAATTACAAT 39786 ||||| | || || |||||||| |||| | | | || ||||||| |||||| | Sbjct 624 TATCAGCGTTTCATCGTTAATCCGCCTAGTGGCGCCATTGTACTGAAGGCGAATTACTAC 683 Query 39787 AACAATATTTACTTTGATGAGTCGCCATTGCGTGAAGAAATGGAGGAATGCAAGGAAAAG 39846 ||||| || || || | || || | | | | |||| || || || | | Sbjct 684 CACAATCCGTATTTCGACCAATCCCCCCTCCCGGCTCAGATGGCGGCCTGTAAAAAGCGG 743 Query 39847 GATTATGAGCTTTACTTGCATATATGGGAAGGCGAACCAGTTGCAGATAGTGAACATGCA 39906 || |||| || || |||||| ||||| || || || || || |||||||| || Sbjct 744 GACGATGATCTCTATCGGCATATCTGGGAGGGAGAGCCGGTCGCGGATAGTGAGATGGCG 803 Query 39907 TTCATTAAACCAATGTGGATTACTGCTGCATTAAACGCGCATGAGAAACTAGGTTTTACT 39966 | || ||||| ||||||| | || || | | || ||| |||| | |||||||| Sbjct 804 ATTATCAAACCCTCGTGGATTGCGGCAGCTATCGATGCCCATCTGAAAATCGGTTTTACG 863 Query 39967 GCTAGTGGTAAAAAGTTTGGCGGGCTAGATGTTGCTGATGAAGGTGAGGA 40016 || | || | || | ||| | || ||||||||||| || ||||| Sbjct 864 GCCTGCGGAGAGAAACGTATCGGATTTGACGTTGCTGATGAGGGCGAGGA 913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143396301338928