Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq66922 553 1e-152 seq31895 432 2e-116 seq66707 134 9e-27 seq66660 84.2 1e-11 >seq66922 Length=4115 Score = 553 bits (612), Expect = 1e-152 Identities = 915/1307 (70%), Gaps = 18/1307 (1%) Strand=Plus/Minus Query 96695 CCAGCATAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATT 96754 ||||| || |||||||| || || | || |||||||| | ||| | || || ||||| Sbjct 2508 CCAGCGTAATTATCAAAACGCGACCACTGACCGTTAAAGGTCAAGCGTACTGTCCCAATG 2449 Query 96755 GGGCCATTTCGTTGCTTTCC---GATAATTACCTCGGCAATGCCCTTCATTTCGCTATCC 96811 ||||| || || || || || ||||||| ||||||| || |||| | |||| Sbjct 2448 GGGCCGTTACGCTGTTTGCCTAGGATAATT---TCGGCAACTCCTTTCAAATTACTATTT 2392 Query 96812 GGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCT 96871 || || ||||| |||||||| | ||||||||| | || || || |||||||| | Sbjct 2391 TCATGGTAGACTTCATCGCGATAGATAAACATGATTAAATCGGCATCTTGCTCAATAGAA 2332 Query 96872 CCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGA 96931 || ||||||||||| || || || ||||| || || || || |||||||| ||||| ||| Sbjct 2331 CCAGATTCACGTAAGTCAGAGTTAACCGGGCGCTTATCTGCTCGCTGTTCTAGCGAGCGA 2272 Query 96932 TTAAGTTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAG 96991 ||||| ||||| || || || ||||| || || ||||| ||||||| |||||||| ||| Sbjct 2271 TTAAGCTGTGATAACGCTACTACCGGCACCTGCAATTCTTTCGCCAGTGCCTTCAGCGAG 2212 Query 96992 CGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCTCCGGGACGCGCATAAGT 97051 || ||||| || || || || || || || ||||| ||| | || || ||||| | Sbjct 2211 CGTGAAATTTCAGCGATCTCTAGTGTACGATTATCAGACAGTGCTGGAACACGCATCAAC 2152 Query 97052 TGCAGGTAGTCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAACACGACGAGCG 97111 || || |||||||||||||||| || |||||||||| || | || || || | Sbjct 2151 TGAAGATAGTCGATCATAATCAGACTTAAACCACCATGCTCACGGAAGACTCGCCGCGAA 2092 Query 97112 CGGGAACGTAGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAATAAAAATATTCTGCTTG 97171 || | ||| | ||| || || || || | |||||||||||||| || |||| || Sbjct 2091 CGAGCACGCATCTCAGTTGGTGTTAGAACAGAGGAGTCATCAATAAACATGTTCTTTTTC 2032 Query 97172 TCCAACAGAATACCCATTGCGCCAGAAACCCGCGCCCAATCCTCGTCGTTAAGTTGCCCT 97231 || || | | |||||| | | ||| | || ||||| ||||| || | ||| || || Sbjct 2031 TCTAATAAGAGACCCATAGTACTAGAGATACGTGCCCAGTCCTCATCATCAAGCTGACCA 1972 Query 97232 GTTCGAATACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGTGAGCGCATCATCAGCTGG 97291 ||||||||||| ||||||||||| || | | |||||| || |||||||| | || Sbjct 1971 GTTCGAATACGCGTCTGATCAACACGAGATAAAGAAGCTAGCATACGCATCATTATTTGT 1912 Query 97292 TGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCGT-TACGAACTGCGGCATT 97350 | | |||||||| | |||||||| | ||| || || || | ||| | || ||||| Sbjct 1911 TCACCAGGCATCTCTAAGCTAAAAATTAGTACTGGTTTTTCCTGTAC-CATAGCAGCATT 1853 Query 97351 TTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGGGCGGCGACAATGAT 97410 ||| |||||||| ||||| || || || ||||| || || || || || ||||| || Sbjct 1852 TTCACATAGATTCATGGCAAAAGTAGTTTTGCCCATCGACGGACGAGCAGCAACAATAAT 1793 Query 97411 GAGATCGGACGACTGAAGCCCTGCCGTCTTCTTATTGAGATCGGTAAATCCGGTATCAAG 97470 | ||| || ||| || || || ||||| ||||| | ||| | |||| ||||| || Sbjct 1792 TAAATCTGAGCGCTGTAGGCCAGCAGTCTTTTTATTCAAATCCTGATATCCAGTATCGAG 1733 Query 97471 TCCCGTTACACCATCATGCGGTCGCTGAAACAACTCTTCTATGCGAGATACCGTTGCATC 97530 || || ||||||||||| ||| || | | | ||| ||||| || | |||| || Sbjct 1732 ACCTGTGACACCATCATGTGGTGTTTGGTATAGCAATTCAATGCGTGAAATAGTTGTTTC 1673 Query 97531 GAGAATGCTG-GCGATATCTTTTGGACCACTACCGCTCTTTT--GTCGTTTTTCAGCTAT 97587 || || ||| | ||| ||| || | || | ||| | || || | ||| || || Sbjct 1672 AAGGAT-CTGATCAATACTTTTAGGGC--CTGCTGCTTTATTAGCTCTATGTTCCGCGAT 1616 Query 97588 TTCAAAAACGCGGCGTTCGGCCATATCCAGCAATTCATTGCTGCCCCGGCCATCCTGCGC 97647 | ||| ||||| ||| || | ||| ||||| || | ||||| || || | | | Sbjct 1615 CTGAAATACGCGTGATTCTGCAAGATCGAGCAAATCTTCGCTGCTACGTCCTTGTGGATC 1556 Query 97648 ATATCCAGCTTCAGCTATTTCATTTGCGACGGAAATCATTTCACGAACAACCGCGCGTTC 97707 || || || || || ||||||||||| || | |||||| ||||| ||||| || ||||| Sbjct 1555 GTAACCGGCATCTGCGATTTCATTTGCTACAGTAATCATCTCACGTACAACTGCTCGTTC 1496 Query 97708 ACGAACGATATCCGCATAAGCACAAATATTTGCCGCGCTGGGCGTGTTCTTTGACATCTC 97767 |||||| ||||| |||||||||| ||||| |||||||| || || || ||||| | ||| Sbjct 1495 ACGAACTATATCTGCATAAGCACCTATATTAGCCGCGCTTGGAGTATTTTTTGATAGCTC 1436 Query 97768 CGCAAGGTACGCAAAACCACCGGCGCGTTC-TAATTTACCGTTCTGTTCAAGTGCTTCAG 97826 || || || ||||| ||||| | | | | || | || || ||| | | ||||| Sbjct 1435 AGCGAGATAGGCAAAGCCACCAAC-CATACTTAGCTCGCCTTTAGTTTCCATCGATTCAG 1377 Query 97827 CAAGTGTTATCAAATCAATCGGTTTGCCATGACTTAATAACCTCTCCATCTCACTGAAAA 97886 ||||| || |||||||||||| || || | ||| |||| |||||| |||| | Sbjct 1376 AGAGTGTAATTGGATCAATCGGTTTACCCTGCTCCAGTAATCTCTGCATCTCCGTGAAGA 1317 Query 97887 TTTCACGATGAGCATTG-GTATAAAAATCATCAGCAACTATACGATCTGCCACTTCATCC 97945 | ||| || | || | | ||||||| | || || | || || | || | |||| Sbjct 1316 TCATACGGTGTG-ATCGCTTGAAAAAATCTTTTGCTACCACGCGCTCAGAAACATTATCC 1258 Query 97946 CAGCGGCAGTTATCAAGCATTAAGCCACCAAGTACAGCTTGTTCTGC 97992 || || |||||| | |||||| ||||| | || | ||||| || Sbjct 1257 CATCGTTCGTTATCTAACATTAAACCACCCAACACTGACTGTTCGGC 1211 >seq31895 Length=1337 Score = 432 bits (478), Expect = 2e-116 Identities = 454/601 (76%), Gaps = 26/601 (4%) Strand=Plus/Minus Query 38358 CCCCGCCGCTAAAATGTTACGAGCGCCGTTTACATCGGCGTTCGCTGTATATCCACAATC 38417 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct 1271 CCCTGCCGCTAAAATGTTACGAGCGCCGTTTACATCGGCGTTCGCGGTATATCCGCACTT 1212 Query 38418 CCGACACACGAATTTACTTTGTGACAGGCGGTTTTCTTTCGCTGTATGGCCACAGCACGC 38477 |||| ||||||| || || | | | || ||||||||||||||||| |||||| Sbjct 1211 GAGACATTCGAATTTGCTCTGCGTCGGCCGATTTTCTTTCGCTGTATGATCACAGCNA-- 1154 Query 38478 GCAACGCTGGCTTGTGTACGCTGGCGGCACTGCCAGTACCTGACCGCCACGCCAGAGCTG 38537 || || || || | ||| | ||||||||| |||||||||||||| Sbjct 1153 ----------------TATGCCGGAGGTATTGCTAATACCTGACCTCCACGCCAGAGCTG 1110 Query 38538 CTTGTACTCAAGCTGGCGGCGCATTTCATACCAGCCCTGATCCAGTATCGAACGGTTTAA 38597 ||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||| || Sbjct 1109 CTTATACTCAAGCTGACGACGCATTTCATACCAGCCCTGATCCAGTATCGAGCGGTTCAA 1050 Query 38598 ACCTGATTTTGCCCGGACATTGCGCCCCGGCTGACTTATCGTACCCGCCGCTGACTTTGA 38657 |||||||| || ||| || || || |||| | |||||| || || || || Sbjct 1049 GCCTGATTTGGCTTTGACGTTTCGTCCGTGCTGCTCTGCCGTACCTTTTGCCGATTTCGA 990 Query 38658 CATGTATTTAACCTTCAAATCCTCAATGACAATCATTGCGTGGTTTTTGCTGATGATCGT 38717 ||||| | |||||||||||||||||||| | ||| ||||||||||||||||| || Sbjct 989 CATGTTACTGACCTTCAAATCCTCAATGACGACCATCGCGTGGTTTTTGCTGATTTCAGT 930 Query 38718 TGTGATTTTATGAAGGTAGTCTCTGCGGATGTTTGCGATACGAAAATGCAGTCGCTGTAT 38777 |||| |||||||||||||||| | ||||| || |||||| | |||| ||||| || Sbjct 929 GGTGACTTTATGAAGGTAGTCTTTACGGATATTGGCGATATCTGAGTGCAAACGCTGGAT 870 Query 38778 TTTGCGTTTCTGCATCTGCCAGTTGTTGCTGAATCTGACCTTGCGGCTTAACTGTCGCTG 38837 || || ||||| ||| |||||| ||||||||| |||| || ||||||||| | || || Sbjct 869 CTTTCGCTTCTGTTTCTTCCAGTTATTGCTGAATTTGACTTTCCGGCTTAACCGGCGTTG 810 Query 38838 AAGTCTCGCCAGCTTCTTCTG----GTTTTTCTGAAAACTATTTACAGGTTCAAAGACTG 38893 |||| | ||||| || | ||| ||||| ||| || || || || ||||| || Sbjct 809 AAGTTTTGCCAGTTTTTCCTGTCGCGTTTT----AAAGCTGTTGACCGGCTCAAATACCT 754 Query 38894 TGCCATCTGACAGCGTGGCGAGTTTAGCCACGCCAGCATCCAGTCCGACCATTGATGCTG 38953 |||| ||||||| ||||| ||||| | | || |||||||| || | ||| | ||||| Sbjct 753 TGCCGTCTGACAATGTGGCCAGTTTTGTTATCCCTGCATCCAGACCAATCATCGTTGCTG 694 Query 38954 A 38954 | Sbjct 693 A 693 >seq66707 Length=2212 Score = 134 bits (148), Expect = 9e-27 Identities = 224/324 (69%), Gaps = 0/324 (0%) Strand=Plus/Plus Query 44714 CATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCGTGTAACGTTCTACACCGGC 44773 ||| ||||| ||||| || | | || | | ||| || ||||| ||| ||||| || Sbjct 8 CATCTGCATAGTGCCTCCAATGTTTACTACTACTTCGGTGGTGTATTTTTCAACACCTGC 67 Query 44774 GTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAGAACCTTTTCG 44833 | || ||||| ||||| |||| ||| | ||||| ||||| || ||||| ||||| || Sbjct 68 CTGGTCAGTCCATTTACGAGTTTGTAGTGTGCCTTCAATGTAAACTTGAGATCCTTTGCG 127 Query 44834 TAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTATGCCATTCTGT 44893 | ||||||| || | |||||| || || || |||||||| | |||||||| || Sbjct 128 AAGGTACTCACCAGCGACTTCAGCTAGCTTGCCAAACAAAACAATACGGTGCCATTCAGT 187 Query 44894 TTGCTCTTTCTGTTGGCCCGTTTGCTTGTCGCGCCATGATTCATTCGTTGCGATGCTGAG 44953 || |||||| || || ||||||||||| ||||| |||| || || | | | Sbjct 188 TTTCTCTTTAGTTTCTCCGGTTTGCTTGTCACGCCAACTTTCAGAAGTAGCTAAAGTTAT 247 Query 44954 TCTTCCGACCGCTCCGCCATTTGGTATATACCTGATCTCCGGGTCTTGCCCCAGGGTACC 45013 | | || || |||||||| || || || | | || |||||||| || || | || Sbjct 248 GTTAGCAACGGCACCGCCATTCGGCATGTAGCGAACTTCTGGGTCTTGACCAAGATTTCC 307 Query 45014 AATCAGGATGACTTTGTTTACACC 45037 || | || |||||||||| ||| Sbjct 308 AACTAAAATTACTTTGTTTATACC 331 >seq66660 Length=2041 Score = 84.2 bits (92), Expect = 1e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 99541 TGCTGGTGCCGATTAACGGACTCGAACCGCTGACATCCTGCTTACAAGGCAGGCGCTCTA 99600 || |||||||| || |||| |||||| | |||| | ||| ||||||| ||| |||||| Sbjct 615 TGATGGTGCCGGCTACCGGAGTCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTA 556 Query 99601 CCAACTGAGCTAAACCGGCAT 99621 ||||||||||||| ||||||| Sbjct 555 CCAACTGAGCTAAGCCGGCAT 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330629193698032