Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq44371 100 7e-16 seq25273 91.5 3e-13 >seq44371 Length=3624 Score = 100 bits (110), Expect = 7e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | ||||| || ||||| ||||| ||||| || || |||| || ||||| Sbjct 1113 ACTAGATGCAACGTAGATTCCTTTTGAATGTTATAATCAGCCAAGGTTCGTCCGTCTTCC 1172 Query 151956 AGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||| || ||||| || |||| | |||||||| | | ||||||||||| ||||| Sbjct 1173 AATTGTTTGCCAGCGAAAATTAAGCGT-TGCTGGTCAGGTGGAATTCCTTCCTTGTCTTG 1231 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| || ||| ||| || | | || ||| || || ||||| || || ||||| Sbjct 1232 AATCTTAGCTTTAACATGTTCAATAGTATCCGAAGGTTCAACCTCAAGTGTGATGGTTTT 1291 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106 ||||| ||||| || || || | ||||||| Sbjct 1292 ACCCGTAAGAGTTTTAACAAAAATTTGCATTT 1323 >seq25273 Length=2210 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | ||||| |||||||| |||||||||||||| |||| || | | ||||| Sbjct 1981 GAGGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGCACGGCCATC 2040 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | || || ||||| || | | || || || | | || ||||| || || Sbjct 2041 TTCCAATTGCTTGCCAGCGAAAATTAAACGTTGTTGATCTGGGGGAATGCCTTCTTTATC 2100 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| ||||| || || |||| | |||| | ||| ||||| | || || || Sbjct 2101 TTGGATTTTAGCCTTTACGTTCTCGATAGTGTCACATGGCTCGACTTCCAAGGTGATGGT 2160 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| || | |||||||||||||| ||||| Sbjct 2161 TTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 2193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152831026556792