Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_031928.1 Length=169936 Score E Sequences producing significant alignments: (Bits) Value seq66944 143 3e-29 >seq66944 Length=5658 Score = 143 bits (158), Expect = 3e-29 Identities = 284/419 (68%), Gaps = 6/419 (1%) Strand=Plus/Plus Query 143367 CATCAGGTCGTTCAACTGGATTCCATAGTCCATATGACGAATACGGTTCTCATCGACACC 143426 |||||| | ||||| || | ||||||||||| ||||||| |||||| || || || || Sbjct 1511 CATCAGTTTATTCAATTGAACACCATAGTCCATGTGACGAACACGGTTATCTTCTACGCC 1570 Query 143427 CTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 143486 ||| || |||| || || | | |||| |||||||| ||||| || ||||| | Sbjct 1571 ACGGTTATTCTTCAAGACCAGTAAACTTTCCACTTCCAAGTGCCATATTGGATAGAATAG 1630 Query 143487 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 143546 || ||||| || || || | |||||||| ||||| |||||||| || ||||| || || Sbjct 1631 TGTTGCAGCACCACCGCGTACACCACCTTGAGAACAAGATTTAACTGCGGTCTGAAAGTG 1690 Query 143547 TTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTC 143606 ||| | ||||| ||| ||| ||||| ||||||| | || |||| | | Sbjct 1691 TTTATAAAATGGGATACAACCCGTATGAAAAGCTTCGCC---GTCACGTATCGAACTTCC 1747 Query 143607 ---AGCACGAATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAAT 143663 |||||||| ||| | || || |||||||| || |||| |||| |||| | Sbjct 1748 CAAGGCACGAATTCGACCGGCATTAATGCCAATACCAGCCCGTTGGGAAACATATTTCAC 1807 Query 143664 TATTGAGTTAGCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACA 143723 |||| | | |||| ||||| || | || || || | ||||| | || || Sbjct 1808 AATTGCACTTGAAGTTGCATTAATCGAATCGAGGCTATCACCGGACTCAATTAGTACGCA 1867 Query 143724 AGAACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAA 143782 ||||| || || || | ||||| ||| | || | ||| || || || || || |||| Sbjct 1868 GGAACTGAACTGGCGAATAGGTGTGCGTACACCGGACATGATTGGTGTGGGCAAAGAAA 1926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212204920320