Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq44371 152 1e-31 seq25273 100 7e-16 >seq44371 Length=3624 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || |||||||| || || ||||| ||||| || ||||| ||| || || Sbjct 1318 CAAATTTTTGTTAAAACTCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTTCGGAT 1259 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || | || ||| |||||||| ||||| |||||||| || || ||||||||| Sbjct 1258 ACTATTGAACATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCACCTGACCAGCAA 1199 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || ||||| | ||||| ||| | || | || ||||||||| | Sbjct 1198 CGCTTAATTTTCGCTGGCAAACAATTGGAAGACGGACGAACCTTGGCTGATTATAACATT 1139 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||| || ||||||| || ||| | |||||| Sbjct 1138 CAAAAGGAATCTACGTTGCATCTAGTATTGCGTCTCAGA 1100 >seq25273 Length=2210 Score = 100 bits (110), Expect = 7e-16 Identities = 148/206 (72%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| ||| | || || ||||| |||||| | || || || | ||| Sbjct 2190 CAAATCTTCGTGAAGACTTTGACTGGCAAAACCATCACCTTGGAAGTCGAGCCATGTGAC 2131 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || || || || || |||||||| || || || || || ||| Sbjct 2130 ACTATCGAGAACGTAAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAACAA 2071 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || ||||| || || || | |||||||| | | |||| |||| || ||| | Sbjct 2070 CGTTTAATTTTCGCTGGCAAGCAATTGGAAGATGGCCGTGC-CTTGTCCGACTACAACAT 2012 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 |||||| || || || || || |||| Sbjct 2011 CCAAAAGGAGTCTACCCTTCA-CTTG 1987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202698612292688