Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq7231 100 2e-16
>seq7231
Length=219762
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
||||||||| ||| | || || ||||| || |||||||| ||| || || ||| |
Sbjct 92384 AATGCAAATTTTCGTTAAGACGTTGACCGGAAAAACCATAACCCTTGAGGTTGAGCCCTC 92325
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | | | ||| ||||||| ||||| ||||| | ||| |||||
Sbjct 92324 GGATACCATCGAAAACGTAAAGGCAAAAATTCAGGATAAGGAAGGCATCCCCCCTGATCA 92265
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
|| | ||||| || || || |||||||| || ||| || || ||||||||||
Sbjct 92264 GCAGCGTCTTATATTCGCTGGAAAACAACTCGAGGATGGACGTACCCTGTCCGATTACAA 92205
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||||||| ||||| ||||| ||| ||||| | || | || |||||
Sbjct 92204 TATTCAGAAAGAATCAACTCTGCACTTGGTGCTGCGCCTTCGTGGAGG 92157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428229254385440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |