Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09] 20,448 sequences; 331,927,360 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq7231 91.5 1e-13 >seq7231 Length=219762 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| ||| | || || ||||| || |||||||| ||| || || ||| | Sbjct 92384 AATGCAAATTTTCGTTAAGACGTTGACCGGAAAAACCATAACCCTTGAGGTTGAGCCCTC 92325 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | | | ||| ||||||| ||||| ||||| | ||| ||||| Sbjct 92324 GGATACCATCGAAAACGTAAAGGCAAAAATTCAGGATAAGGAAGGCATCCCCCCTGATCA 92265 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 || | ||||| || || || |||||| | || ||| || || |||||||||| Sbjct 92264 GCAGCGTCTTATATTCGCTGGAAAACAACTCGAGGATGGACGTACCCTGTCCGATTACAA 92205 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||| || ||||| ||||| ||| ||||| | || | || ||||| Sbjct 92204 TATTCAGAAAGAATCAACTCTGCACTTGGTGCTGCGCCTTCGTGGAGG 92157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410694425329472