Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq19563 95.1 3e-14
>seq19563
Length=274849
Score = 95.1 bits (104), Expect = 3e-14
Identities = 167/240 (70%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902
||||| || ||||| || ||||||||||| || | || || ||| || ||||||
Sbjct 231926 TGGAGCGCTCATATCTGCTTAAAATTGATGGAAAAGTGGTTGAGCGACCACAACACATGC 231867
Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGC--TCGAGACGTA 248960
| ||||| || ||||| || |||||| |||||| || || ||| | || || ||
Sbjct 231866 TCATGCGTGTAGCTGTTGGTATTCACGGCACTGACATCGA-CGC-TGCCATAGAAACATA 231809
Query 248961 CACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTAC 249020
| ||||||||| ||| | || || |||| |||||| | ||||| ||||| ||
Sbjct 231808 TAATCTGATGAGTGAAAAGTGGTTCACGCACGCCAGCCCGACGTTGTTCAATGCCGGCAC 231749
Query 249021 CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGG 249080
| | |||||||| || |||||| | ||| ||||| |||| || ||| |||| ||
Sbjct 231748 CTGTAGGCCGCAGCTGAGTTCCTGCTTTTTGCTTACCATGAAAGATGATTCTATCGAAGG 231689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073485083940864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |