Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_008206.2
Length=78296
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 188 4e-43
>seq19061
Length=15585
Score = 188 bits (208), Expect = 4e-43
Identities = 240/331 (73%), Gaps = 6/331 (2%)
Strand=Plus/Minus
Query 49005 ACTGTCGTCGGTAATCTGACCGCCGACCCCGAGCTGCGATTCACCCCGAGTGGCGCGGCT 49064
||||| ||||| || |||| ||||| ||||||||||| ||||| |||| ||||||||
Sbjct 14194 ACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGGTTCACACCGACCGGCGCGGCC 14135
Query 49065 GTCGCAAACTTCACGGTCGTGTCCAATGACCGTTTCCTCAAGGATGGG------GAGTGG 49118
||||| |||||||| |||| ||| | || | || | | | ||||||
Sbjct 14134 GTCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTTCGACCGTCAGACCAACGAGTGG 14075
Query 49119 CAGGATAAGGACCCCGTGTTCCTCCGCTGCAACGTGTGGCGTGAGTACGCTGAGAACGTC 49178
|||| || | ||||| | ||||||||| | ||||| ||| ||| ||||||||
Sbjct 14074 AAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACATCTGGCGCGAGGCCGCGGAGAACGTG 14015
Query 49179 GCTGAGTCGCTGACACGCGGCACCACCGTGATCGTCACCGGCAAGCTCTCGCAGCGGAAC 49238
|| ||||||||||| | ||| | ||| ||||| ||||||| |||| ||||||
Sbjct 14014 GCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGACCGGCAGGCTCAAGCAGCGCTCG 13955
Query 49239 TTCGAGGACCGCGAGGGGAACAAGCGCACCGTCGTGGAGCTGGAGGTCGATGAGATCGGA 49298
| |||| ||||||||| | ||||| |||||||| ||||| || ||||| ||||||||
Sbjct 13954 TACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGTCGAGCTCGAAGTCGACGAGATCGGG 13895
Query 49299 CCCGCTCTGCGTTTCGCCACGGCGAAGGTGA 49329
|| | ||||| | | |||| ||||| ||||
Sbjct 13894 CCTTCCCTGCGCTACTCCACCGCGAAAGTGA 13864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 250359992233696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |