Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq17800 86.0 6e-12
>seq17800
Length=133550
Score = 86.0 bits (94), Expect = 6e-12
Identities = 203/304 (67%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 20281 GGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGA 20340
|||||| || || ||||| || | |||||||| | | ||| ||||| ||||| ||
Sbjct 12244 GGCAATATTGAACGGAACACCGAGGCCCATGTCGGCGCTGCGCTGGTACAGTTGACATGA 12303
Query 20341 AAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAA 20400
| ||||| | || || ||||||||| | |||||||||||||||||||||||
Sbjct 12304 GACTTCACCTTTGGCGACGTAAAATTGAGCCAGACAGTGACAGGGCGGAAGCGCCATCTT 12363
Query 20401 CGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTT 20460
| ||| |||| ||||| || | | ||| || | || |||| ||||| | ||
Sbjct 12364 TGGCAAATCCGAGACATTCCATGCCGATAGAATAATACGTCGGTCGTTTGGATTGCTCTT 12423
Query 20461 TATTAAATCCACAATGTACGACAAT-TGGTCAAACCCCTGGCCTGTATAGTCAGCATCCG 20519
|| | | || | | |||| || |||| |||||| || || || |||| |
Sbjct 12424 TAGTGTGCTGATGATCTGAG-CAATCTGATCAACTCCCTGGTTCGTGTAATCGGCATGCA 12482
Query 20520 CGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCC 20579
| |||| | || || || || | ||||||||| ||||| || || || ||||| |
Sbjct 12483 TATTTGTGTACTCAGCACCGAAATGGCGCCACTGGAAGCCGTACACGGGGCCTAAATCGC 12542
Query 20580 CCTC 20583
| ||
Sbjct 12543 CTTC 12546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441259985112320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |