Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_009603.1
Length=46365
Score E
Sequences producing significant alignments: (Bits) Value
seq19061 289 8e-74
>seq19061
Length=15585
Score = 289 bits (320), Expect = 8e-74
Identities = 293/376 (78%), Gaps = 4/376 (1%)
Strand=Plus/Minus
Query 11006 ATGGCAGGGGAGACCGTGATCACGGTCGTGGGGAACCTCACTGCAGACCCTGAGCTGCGT 11065
|||||||| || ||||| ||||| || || || ||| | || || || || ||||||||
Sbjct 14215 ATGGCAGGCGACACCGTCATCACTGTGGTCGGCAACTTGACGGCCGATCCCGAGCTGCGG 14156
Query 11066 TACACGCAGAACGG-GCTGCCGGTGGCGAACTTCACCATCGCATCGACGCCGCGCACCTT 11124
| ||| | || ||| || |||| | |||||||||||| |||| |||||||| || |||||
Sbjct 14155 TTCACACCGACCGGCGCGGCCG-TCGCGAACTTCACCGTCGCGTCGACGCCTCGGACCTT 14097
Query 11125 CGACCGTCAGGCGAACGAGTGGAAGGACGGCGAAGCGCTGTTCCTCCG-TGCGTCCGTGT 11183
|||||||||| | |||||||||||||||||||||||||||||| | || ||| | | |
Sbjct 14096 CGACCGTCAGACCAACGAGTGGAAGGACGGCGAAGCGCTGTTCTTGCGCTGCAACA-TCT 14038
Query 11184 GGCGCGAGTTCGCGGAGCACGTGGCGGGTTCGCTGACCAAGGGCATGCGGGTCATCGCAT 11243
|||||||| ||||||| ||||||| | |||||||||| |||| ||| |||||||
Sbjct 14037 GGCGCGAGGCCGCGGAGAACGTGGCCGAGTCGCTGACCAGGGGCGCGCGCGTCATCGTGA 13978
Query 11244 CCGGACGCCTGAAGCAGCGCTCCTACCAGGACCGCGAGGGCAACAACCGCACCGCGATCG 11303
|||| | || ||||||||||| ||| || |||||||||| | || || |||| |||
Sbjct 13977 CCGGCAGGCTCAAGCAGCGCTCGTACGAGACCCGCGAGGGCGAGAAGCGGACCGTCGTCG 13918
Query 11304 AGCTCGAGGTGGACGAGATCGGCCCGAGCCTCCGCTACGCGACGGCGCAGGTCACCCGGG 11363
||||||| || ||||||||||| || ||| |||||| | || ||| | || | ||| |
Sbjct 13917 AGCTCGAAGTCGACGAGATCGGGCCTTCCCTGCGCTACTCCACCGCGAAAGTGAACCGCG 13858
Query 11364 CCGCCCGCCGTGACGG 11379
|||| ||| | | |||
Sbjct 13857 CCGCGCGCGGCGGCGG 13842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148210402809152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |